Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842629

Identifier: 50842629

GI number: 50842629

Start: 1249066

End: 1249416

Strand: Direct

Name: 50842629

Synonym: PPA2379

Alternate gene names: NA

Gene position: 1249066-1249416 (Clockwise)

Preceding gene: 50842628

Following gene: 50842630

Centisome position: 48.79

GC content: 59.54

Gene sequence:

>351_bases
GTGATTAGCGGGTTGGCGACCTCCCATAGGATTAATCGCGCAATACGGGTCTCACTGTCGGCTGCACGCGCGCTAGTTGG
TCCGGAGTGCCGTGACTGCAATCACCCCCCCCCCCAGACGCATGAAGGTGTTCAGCAGTCTGATAAGCGGAGAAGAAGCC
ACGACGCCGACTTTGGCTGCGACGTCGTGGGACAGTCTGTCGACCACGTGGCGCAGGTTTCCAACGACAAGTCACAACAC
CCCGGCAACGGTGGTATCAAGAAAGGGCCTTGTCACGTTACCCACGCGACAGCTTCACACATCGTCGCGCCCACCTCGTA
CGTCAATACTTGCCGTTCGCACCAGGGGTGA

Upstream 100 bases:

>100_bases
ACCTATTTCAGGCAGATCAGAGGTAGTGCCGCAGTAGCCAGTTCGCCCATTCGGCTGCACGTCAAGAGCACGGCGCTGCT
AATACCCGGACGCAATTCCG

Downstream 100 bases:

>100_bases
TTCGAGATGTCCTTGGTTCCGACTACTCTGTCTAGGTCAGCACGATCGCAAGGCACGATCCCAAGGGCTTGGGGTCGGAA
TGTGAAAGGAGTCCCTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MISGLATSHRINRAIRVSLSAARALVGPECRDCNHPPPQTHEGVQQSDKRRRSHDADFGCDVVGQSVDHVAQVSNDKSQH
PGNGGIKKGPCHVTHATASHIVAPTSYVNTCRSHQG

Sequences:

>Translated_116_residues
MISGLATSHRINRAIRVSLSAARALVGPECRDCNHPPPQTHEGVQQSDKRRRSHDADFGCDVVGQSVDHVAQVSNDKSQH
PGNGGIKKGPCHVTHATASHIVAPTSYVNTCRSHQG
>Mature_116_residues
MISGLATSHRINRAIRVSLSAARALVGPECRDCNHPPPQTHEGVQQSDKRRRSHDADFGCDVVGQSVDHVAQVSNDKSQH
PGNGGIKKGPCHVTHATASHIVAPTSYVNTCRSHQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12405; Mature: 12405

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGLATSHRINRAIRVSLSAARALVGPECRDCNHPPPQTHEGVQQSDKRRRSHDADFGC
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
DVVGQSVDHVAQVSNDKSQHPGNGGIKKGPCHVTHATASHIVAPTSYVNTCRSHQG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure
MISGLATSHRINRAIRVSLSAARALVGPECRDCNHPPPQTHEGVQQSDKRRRSHDADFGC
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
DVVGQSVDHVAQVSNDKSQHPGNGGIKKGPCHVTHATASHIVAPTSYVNTCRSHQG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA