| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842577
Identifier: 50842577
GI number: 50842577
Start: 1190396
End: 1191412
Strand: Reverse
Name: 50842577
Synonym: PPA1099
Alternate gene names: NA
Gene position: 1191412-1190396 (Counterclockwise)
Preceding gene: 50842579
Following gene: 50842576
Centisome position: 46.53
GC content: 58.8
Gene sequence:
>1017_bases ATGGATCGGCAGAGCAATCGCTTCAGCTGGCATCCCGGAATCGTGGGTCCTGATCAGGAGGTGTCCGCTCTCATCACTCT GGTGCAGTCTTTTAGTGACACCGGTCTGGTACAGGCACGGGTGCGCGACGCCATCTTATCCCAGCTTCCCCACCACGAGC TCGGGGAATTCGACATTGATCTGTTGCTGGACCATCGCGATTCCCGTCAGCCCATCATCTTCGACACCGACCACTTCGAG GGGTACGAGCGCCCCCGCCTCGTGCTGCACGAAGTCACCGATCAACTTGGCCAAGCGTTCCTTGTATTGGAAGGCCCAGA GCCGGCTCTCGGCTGGGAATCGTTGGTGTCGTCTCTAACGAGTCTTGTCGACTCTATGGGGATCCGACTGACCGTCATTA CCGATTCGATCCCGATACCGACCCCTCACACCCGTCCTGCCATAGTCACACGCTGGGCATCACGACCTGAACTCATTTTG GGCTCGACGTCTCCCTTCGGCCGCCTTCAGGTACCGGCCTCATTCCCCGTCGTACTCGGTCAGCGGTTGGGGGAAACGAA CCACGCTGTCATCGGGCTTGCCTCCCATGTACCCCATTACTTAGCCGATCTGGATTATCCTGAATCGGCTCGCGCTCTCG TGGAGGCATTACGAGGAGCAACCGGCCTGGCACTACCCATCAACTCCTTGGCTGTAGCTGCCAACACAGTCCGCGCCGAG ATCGATACCCAGGTCAATAATTCTGAAGAGCTCAAAGCTATGCTCCATGCTCTAGAGGAGCAGTATGACTCCCGGGTTGC CCAGCGAGAGCTCGGCACAACGCAAGTTGCCGTCCCAGATGCCGAGGACATCGGTGCTGAAGTCGAAGACTTCCTGCGCT CGATCGACGAGGATGATGGACCCAGCAACGACGATCCCGACACTCAAGGCTCTGGTCCCCGACGCAGTAGCGATGATACT TCCGACGACGACAAGCCTGATTATCACCCCCGCCGCGGGGGCGACCTGGACAACTGA
Upstream 100 bases:
>100_bases GGTCGATTGGCGACGCGGTCAGGCTACCTATCAGCACAACGGAATAGAGTGAAGACTCACGGGGTTATACCAACCTGCCC CGACGGAAAGGAGGACGCCC
Downstream 100 bases:
>100_bases CGGCGGTGTCGGTACCCGAGCCTAGACTGCCCACCATGGATCTGGGAGTCGACCTAGGAACCACCTACAGTGCGGTGGCT GCTATGGAATTTACTCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDIDLLLDHRDSRQPIIFDTDHFE GYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLTSLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELIL GSTSPFGRLQVPASFPVVLGQRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDGPSNDDPDTQGSGPRRSSDDT SDDDKPDYHPRRGGDLDN
Sequences:
>Translated_338_residues MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDIDLLLDHRDSRQPIIFDTDHFE GYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLTSLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELIL GSTSPFGRLQVPASFPVVLGQRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDGPSNDDPDTQGSGPRRSSDDT SDDDKPDYHPRRGGDLDN >Mature_338_residues MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDIDLLLDHRDSRQPIIFDTDHFE GYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLTSLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELIL GSTSPFGRLQVPASFPVVLGQRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDGPSNDDPDTQGSGPRRSSDDT SDDDKPDYHPRRGGDLDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37031; Mature: 37031
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDID CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEE LLLDHRDSRQPIIFDTDHFEGYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLT EEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHH SLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELILGSTSPFGRLQVPASFPVVLG HHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHH QRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE HHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHH IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHHHCCCCCC PSNDDPDTQGSGPRRSSDDTSDDDKPDYHPRRGGDLDN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRQSNRFSWHPGIVGPDQEVSALITLVQSFSDTGLVQARVRDAILSQLPHHELGEFDID CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEE LLLDHRDSRQPIIFDTDHFEGYERPRLVLHEVTDQLGQAFLVLEGPEPALGWESLVSSLT EEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHH SLVDSMGIRLTVITDSIPIPTPHTRPAIVTRWASRPELILGSTSPFGRLQVPASFPVVLG HHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHH QRLGETNHAVIGLASHVPHYLADLDYPESARALVEALRGATGLALPINSLAVAANTVRAE HHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHH IDTQVNNSEELKAMLHALEEQYDSRVAQRELGTTQVAVPDAEDIGAEVEDFLRSIDEDDG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHHHCCCCCC PSNDDPDTQGSGPRRSSDDTSDDDKPDYHPRRGGDLDN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA