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The map label for this gene is yccS [C]

Identifier: 50842574

GI number: 50842574

Start: 1187793

End: 1189547

Strand: Reverse

Name: yccS [C]

Synonym: PPA1096

Alternate gene names: 50842574

Gene position: 1189547-1187793 (Counterclockwise)

Preceding gene: 50842575

Following gene: 50842573

Centisome position: 46.46

GC content: 59.09

Gene sequence:

>1755_bases
ATGAGCAAACCTAACCAGCCGTCGAAGCCTCGGCAGCTGATACGCAAACTCATCACAATTCATTCTGCCCCTGGGCGCAG
CCGACAGGCGGTCATCTCCGTCATCCCGATAGCTGTGTCCCTCGTGACTATGGGCCTGATCGTCAGCCCGACGCATGCGG
CTATGGGCATGATAGGAGCAATGGGCGCCCTAGCCGGCAACAACAATGCTCCCTTGTCACGAGCCCGAATCCTTTTTGGA
GTTGGTACTGCGACGATCTTTTCTCAATGCCTAGGCCTGATGTCGGTGCAGATCGAATGGCTTCTGCCCATCATCCTCGC
TAGCTGGAGCCTGATCGTCATCTGGGTATGGCACGCCCTGCAGCTGGGCCCGCCGGGCCCACTTAATATTCTCTTCGCAG
CCGCATTCGGCACCTATATGGCCAGTCGCGGCTGGACGGTCAGCACGGTATTCACTTCCACCGTGCCGTCCTTCCTCATC
GCCGCTATCGTATCGATGATCATCATCCTCGCCTCTCCGCACCGCCCGGTCCGTGCCGCAGTTAAAAAGGCTGAAAACGC
AGTCAACGCCTACTGCGAACCTGATGACGATGCCGACAGCCACGAAGTTGCACGACTACGTTCAGCGGCCCACGCGGCCA
TTCACCTAGCGTGGTGGGCCTACAATGACGGTCACTCCTCCGGCGTGGACAACCCGTCCGAGATGTCCGAGCTGTCGGAT
TTGCGAGCCCGCCTCATCACCGCCCACATGCGACTCGAGCACGAGCTGCGACTGGAAGCCTTCCCCTCGGCCGATGTTTC
CCTGCCGGACCATGTCGACTGGACTCCGCTTGGTCGCCCCAAAGCCAGCTACCTGCTGCGAACTGCGCTGGAACGGGGAT
CGCGACCGACGATGGTGGCACTGCGCGCGGCAACAGGTGTCTTCTTCGCCTCTCTGCTTATGATCCTGTTACCGTTCGGC
CATCCATACTGGGCGGTACTGAGCGTCCTCATCATGATTCACATGGACGCAACTCGCTCGGACATGACGATCCGCGCCAT
TCACCGGGTGCTCGGTACCGTCGTCGGCCTCGGCCTGTACCTGGCGATCGCCGCATTCGGCCCCTCAGGCTGGGTCAAGA
TCGGTCTCATCATCGTTTTCCTGTGGACCATGCAAGCCCTGGTGACGCGCAATTACGGTCTCGCCTGCATCTTTATCACC
TGTTTCGCACTATTCATGACGCCACTAACAAAGCCCGGTCAGATGTACCAGCTCGCCCAGGACCGCATCGTCGAAACTAT
TGTGGGTTTGACAATCGGCATCGTCACCATCCACATCGTCGGTCGACGCGCCCCAGTACTGCTGGTGCGAAGTCAATATC
GCCGAACCCTTCGTTCCATGATGCCAGTACTGAGATCCCTATCTCAGGGACGCACCAAAACCCCGCAAGCTCAGATCGAG
CGCAATCAGATGGTCCACGAACTCATTCAAGGTTCGGCCTTGCTGTCGGCCACCCGTCCTGATGCTCCGCAGGCTTTACA
AGACTGGTCCAAGGTAGACCGCACTGTCACCGAAACCGGCTACGACCTGCTTTCGGTCTGTTGGCACACTGGTAACGGAC
CGGTGCCTTGGGCTCGGCGGCTGCTGGCCGATATCGCCATCTTCATTACAGGTCTTCCGCCGATCTCGAGCCAGAACCTT
GACGCCCACAGCGTCGCCGAAGAGATGGAGAAGATTCGGATGGATATGGTGACCTCTCTACCGGGGGTCAAGTGA

Upstream 100 bases:

>100_bases
AAACTGGCATGATCACCGCGACAATTACCGACGTGGACACTGGCTGGTCTATTACTGCCACTAAGGGCCGGCCTACGACG
AGCACCGGTACGGGTCGCGC

Downstream 100 bases:

>100_bases
TCGAGTACAGCGTTCTAGCAGGCCCAGTTGAGACAGAACTTGAGATCAAGCGATCAGTCTTCCTCACCCGGCTGGTGCGC
GTGACCTGTGAGGACGAGGC

Product: membrane spanning protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGAMGALAGNNNAPLSRARILFG
VGTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHALQLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLI
AAIVSMIIILASPHRPVRAAVKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSD
LRARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVALRAATGVFFASLLMILLPFG
HPYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLYLAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFIT
CFALFMTPLTKPGQMYQLAQDRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIE
RNQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARRLLADIAIFITGLPPISSQNL
DAHSVAEEMEKIRMDMVTSLPGVK

Sequences:

>Translated_584_residues
MSKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGAMGALAGNNNAPLSRARILFG
VGTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHALQLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLI
AAIVSMIIILASPHRPVRAAVKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSD
LRARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVALRAATGVFFASLLMILLPFG
HPYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLYLAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFIT
CFALFMTPLTKPGQMYQLAQDRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIE
RNQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARRLLADIAIFITGLPPISSQNL
DAHSVAEEMEKIRMDMVTSLPGVK
>Mature_583_residues
SKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGAMGALAGNNNAPLSRARILFGV
GTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHALQLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLIA
AIVSMIIILASPHRPVRAAVKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSDL
RARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVALRAATGVFFASLLMILLPFGH
PYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLYLAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFITC
FALFMTPLTKPGQMYQLAQDRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIER
NQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARRLLADIAIFITGLPPISSQNLD
AHSVAEEMEKIRMDMVTSLPGVK

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63865; Mature: 63734

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGA
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MGALAGNNNAPLSRARILFGVGTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHAL
HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLIAAIVSMIIILASPHRPVRAA
HCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSD
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHH
LRARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEH
LRAATGVFFASLLMILLPFGHPYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFITCFALFMTPLTKPGQMYQLAQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
DRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RNQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARR
HHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH
LLADIAIFITGLPPISSQNLDAHSVAEEMEKIRMDMVTSLPGVK
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKPNQPSKPRQLIRKLITIHSAPGRSRQAVISVIPIAVSLVTMGLIVSPTHAAMGMIGA
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MGALAGNNNAPLSRARILFGVGTATIFSQCLGLMSVQIEWLLPIILASWSLIVIWVWHAL
HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGPPGPLNILFAAAFGTYMASRGWTVSTVFTSTVPSFLIAAIVSMIIILASPHRPVRAA
HCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VKKAENAVNAYCEPDDDADSHEVARLRSAAHAAIHLAWWAYNDGHSSGVDNPSEMSELSD
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHH
LRARLITAHMRLEHELRLEAFPSADVSLPDHVDWTPLGRPKASYLLRTALERGSRPTMVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEH
LRAATGVFFASLLMILLPFGHPYWAVLSVLIMIHMDATRSDMTIRAIHRVLGTVVGLGLY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LAIAAFGPSGWVKIGLIIVFLWTMQALVTRNYGLACIFITCFALFMTPLTKPGQMYQLAQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
DRIVETIVGLTIGIVTIHIVGRRAPVLLVRSQYRRTLRSMMPVLRSLSQGRTKTPQAQIE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RNQMVHELIQGSALLSATRPDAPQALQDWSKVDRTVTETGYDLLSVCWHTGNGPVPWARR
HHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH
LLADIAIFITGLPPISSQNLDAHSVAEEMEKIRMDMVTSLPGVK
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA