| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842569
Identifier: 50842569
GI number: 50842569
Start: 1184237
End: 1184785
Strand: Direct
Name: 50842569
Synonym: PPA1091
Alternate gene names: NA
Gene position: 1184237-1184785 (Clockwise)
Preceding gene: 50842567
Following gene: 50842570
Centisome position: 46.25
GC content: 60.11
Gene sequence:
>549_bases ATGTGTCGAACCGGCACACAGGGGAGTAAAAGTCAACCCTTGCCGGACCGATGGTTGTCGTGCTGTTCTGCTGGCATGAC GATGCATCCCTCGTGCGATCGACACTCGACCCCACCGCTCTCGCGATGGCGTTTCCCTGTCTCCCCACAGCGACGTCGTG ACGATCGCGGCGTGAGTATGTCTGTTCTTGTCACCGTGTTACTGCCAATCCTTCTGATATCCGCGGGGGTGGCAGTCGAT GGTGCAGAGCGATCTCGGGCAGTACGCGTCGCCCACACTGTTGCCGCCGAGGCGGCTCGAGCCGGGTGTGAGGAAGGATC CGCGGCACAGCTCGTCGGTCAAGATGGGTCTAGTGCTGCTCGTATGGCGGCGGAGGCATCCGCGCGAAGGGCTAAAGCGG ATGGACTAAGCCAGCTTGTCATCGATGTCAATGGAGACGCCGTCAGCGTCGCGACGGAAATCACCCGGCCTACTCGTCTA TTAGCCCTTATTGGACTAACCGAAGTACACGGTCGGGCGAGCGAAATGTGTACTTTGCTGGCTCGCTGA
Upstream 100 bases:
>100_bases GCACGGCGCAAATCCGCCCGCGGTGAGGAGTGCGACCTTCTTGACGGCCATAGGGAAACCTTTCGTTTGTCGTGTGGGGT AACGCTAGCAAGCCTATGGT
Downstream 100 bases:
>100_bases GGCCGTTGCAGCGATACAATGATGAGGTGTCTAAGTATTTTCCGGTCCACCCGGAGAACCCGCAGCAGCGTTCTCTCAAT CAGATCGTCGACATCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MCRTGTQGSKSQPLPDRWLSCCSAGMTMHPSCDRHSTPPLSRWRFPVSPQRRRDDRGVSMSVLVTVLLPILLISAGVAVD GAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSAARMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRL LALIGLTEVHGRASEMCTLLAR
Sequences:
>Translated_182_residues MCRTGTQGSKSQPLPDRWLSCCSAGMTMHPSCDRHSTPPLSRWRFPVSPQRRRDDRGVSMSVLVTVLLPILLISAGVAVD GAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSAARMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRL LALIGLTEVHGRASEMCTLLAR >Mature_182_residues MCRTGTQGSKSQPLPDRWLSCCSAGMTMHPSCDRHSTPPLSRWRFPVSPQRRRDDRGVSMSVLVTVLLPILLISAGVAVD GAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSAARMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRL LALIGLTEVHGRASEMCTLLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19187; Mature: 19187
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRTGTQGSKSQPLPDRWLSCCSAGMTMHPSCDRHSTPPLSRWRFPVSPQRRRDDRGVSM CCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCHHHCCCCCCCHHCCCCCCCHH SVLVTVLLPILLISAGVAVDGAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH RMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRLLALIGLTEVHGRASEMCTLL HHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH AR CC >Mature Secondary Structure MCRTGTQGSKSQPLPDRWLSCCSAGMTMHPSCDRHSTPPLSRWRFPVSPQRRRDDRGVSM CCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCHHHCCCCCCCHHCCCCCCCHH SVLVTVLLPILLISAGVAVDGAERSRAVRVAHTVAAEAARAGCEEGSAAQLVGQDGSSAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH RMAAEASARRAKADGLSQLVIDVNGDAVSVATEITRPTRLLALIGLTEVHGRASEMCTLL HHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA