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The map label for this gene is ydaO [H]

Identifier: 50842541

GI number: 50842541

Start: 1150080

End: 1152104

Strand: Direct

Name: ydaO [H]

Synonym: PPA1059

Alternate gene names: 50842541

Gene position: 1150080-1152104 (Clockwise)

Preceding gene: 50842538

Following gene: 50842542

Centisome position: 44.92

GC content: 56.94

Gene sequence:

>2025_bases
GTGAAGGTTTTCCAAGCCGTCAAAAGGGTGCTCATCGGGCGCAAACTCGAGAGCAGTGCGCTGGGCGAGACCCTCCTTCC
GAAGTGGATCGCGCTGCCCGTGTTCGCCTCTGATGCGCTCTCGAGCGTGGCATACGCTCCCGACGAGATCCTTATTACCT
TGTCTTTGGCTGGTACTGCCGGGTTCGCGTTCTCGTGGAAAATTGGTATTGCCGTCGCCTTGGTCATGCTCATTGTGGTA
ATGAGCTACCGCCAGACGGTGCACGCTTACCCCTCAGGCGGTGGCGATTATGAGGTTGCGACAGTCAACCTGAGTCCACG
TTTTGGGCTCGTGGTGGCCAGCGCGCTTCTCGTCGATTATGTGCTGACAGTGGCCGTTTCGGTGTCGTCGGGTGTCCAGA
ACGCCGAGGCGATGATCCCCGGACTCGCTGGTCATGAAGGTGTTGCAGCGGCCGTCGTTATAGCTGTTCTCACCGCCATG
AATTTACGAGGTGTGAGGGAATCAGGAACATTTTTTGCTGTCCCAACCTATGCTTTCATGATCTCGGTGATCTGCATGGT
GGTGTGGGGACTCACGAGGATCTTCGTCCTAGGAGACAATCTTCGCGCCCCAACCGCAGATTTCACCGTCGTCGGTGCAC
CGAAGTACACCGGCTTGGTCGGTGTTGCTTTCGTCGTTCTTATGGCGCGTACTTTCTCGTCAGGCTGTGCCGCACTGACA
GGGGTCGAGGCGATCTCCAACGGTGTGCCGTCTTTCCGTGAACCGAAGTCAAAGAACGCCGCCACGACGTTGGCGATGCT
TGGCGGGATTGCCGTCTCGATGCTTATGGGCATTCTCGTCTTGGCCAGTGTCACCGGTGTCAAGATGTTCGATGAGACGG
GGGAGTCACATCTCGTCGATACGCATGGACACGCTGTTAAAGAGCAAGTGACGGTTGTTGGTCAGTTGGCGCGCACCGTC
TTCTACGACTCGTTCAAACCGGGCTTCTACATCATGATCGTCTGTACGATGATCATCTTGTTCTTGGCTGCCAACACCGC
CTTCAACGGTTTCCCGGTGCTGGGCTCGATCCTCGCCCGTGACGGCTTCCTGCCGCGTCGTCTCCATGCCCGCGGTGACC
GTCTCGCCTACTCCAACGGCATCTTGACCCTTGCCACCGGTGCCATCATTTTAGTGCTGGTTTTTAACGCCTCCGTGACA
GCGCTTATCCAGCTATACGTAGTTGGAGTTTTTATCTCCTTCACAGTGAGCCAGACCGGCATGATGCGCCACTGGACGCG
CCTGCTGCGTACCGATACTTCGGCCGGGACCAAGGAACGTCGCCGCTGGCAGCACTCAAGGATCATTAACGGCATTGGCT
TGGTCGGGACCGGCATCGTTCTGATCATCATCTTGGCGTCGAAGTTCATTCATGGCGCTTATCTGGCACTTATTGCGATG
GCCGTGGTGTACGTGCTCATGACGTCGATTAAGAAGCATTACGACTCGGTGGCCCGCGAGTTGGAGCTCAATAGCCCGTC
TGATCGCGCCTTGCCCTCGCGCGTACATGCGGTGATCATGATTTCTGACCTCAACAAGCCGACGATGAGGGCTATACAGT
TCGCGAAGGCTACTGTCCCAACTTTCTTGGAGGCTGTCATCGTCGACGTCGACCCCGACGCTACGGAGCGCCTGCTGGAG
CGCTGGGACGAGGAGGACATCGACATCCCCCTCAGGATCATTGCTTCCCCATATCGTGAGATCACCAACCCGTTAATCGA
TCACATTCGCCGTATCCGCAGCGAAAATCCGCGAGACATGGTCGAGGTCTTTATTCCGGAGTACGTTGTTGGCCACTGGT
GGGAACATCTACTGCACAACCAGACGGCGCTCGTCGCGCGTGCCCGGCTACACTTTATGCCGGGTGTGCTTATCTCCTCA
GTTCCTTACCAGTTGCGTAGCTCGGCGATTCTCGAAAAGCGTTGGAAGCGTAACGATCCTCGTTCTTGGCGTGATCCTGG
TGCCACCATCACTCCCCGGCGTTGA

Upstream 100 bases:

>100_bases
TCGTTTGCGGGCGTTTGTCGACCTGACGATGATGAGGTTGCCGGATGGGATGGTGGTGGCGACGTGCCGATGATGTCGCA
CGCAAGTAGAGTGGCCCGCC

Downstream 100 bases:

>100_bases
GATGCCACCGAGGGCCTTAGACTTAGATAAATGCATGAGTCTGTTGGTGCGTCCCAGGGCGATGAATTCGACCTTGGCAT
GGGCAATATCGCTCACGGTG

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MKVFQAVKRVLIGRKLESSALGETLLPKWIALPVFASDALSSVAYAPDEILITLSLAGTAGFAFSWKIGIAVALVMLIVV
MSYRQTVHAYPSGGGDYEVATVNLSPRFGLVVASALLVDYVLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAVLTAM
NLRGVRESGTFFAVPTYAFMISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT
GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVDTHGHAVKEQVTVVGQLARTV
FYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILARDGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVT
ALIQLYVVGVFISFTVSQTGMMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM
AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVPTFLEAVIVDVDPDATERLLE
RWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDMVEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISS
VPYQLRSSAILEKRWKRNDPRSWRDPGATITPRR

Sequences:

>Translated_674_residues
MKVFQAVKRVLIGRKLESSALGETLLPKWIALPVFASDALSSVAYAPDEILITLSLAGTAGFAFSWKIGIAVALVMLIVV
MSYRQTVHAYPSGGGDYEVATVNLSPRFGLVVASALLVDYVLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAVLTAM
NLRGVRESGTFFAVPTYAFMISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT
GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVDTHGHAVKEQVTVVGQLARTV
FYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILARDGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVT
ALIQLYVVGVFISFTVSQTGMMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM
AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVPTFLEAVIVDVDPDATERLLE
RWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDMVEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISS
VPYQLRSSAILEKRWKRNDPRSWRDPGATITPRR
>Mature_674_residues
MKVFQAVKRVLIGRKLESSALGETLLPKWIALPVFASDALSSVAYAPDEILITLSLAGTAGFAFSWKIGIAVALVMLIVV
MSYRQTVHAYPSGGGDYEVATVNLSPRFGLVVASALLVDYVLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAVLTAM
NLRGVRESGTFFAVPTYAFMISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT
GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVDTHGHAVKEQVTVVGQLARTV
FYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILARDGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVT
ALIQLYVVGVFISFTVSQTGMMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM
AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVPTFLEAVIVDVDPDATERLLE
RWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDMVEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISS
VPYQLRSSAILEKRWKRNDPRSWRDPGATITPRR

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73456; Mature: 73456

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFQAVKRVLIGRKLESSALGETLLPKWIALPVFASDALSSVAYAPDEILITLSLAGTA
CCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
GFAFSWKIGIAVALVMLIVVMSYRQTVHAYPSGGGDYEVATVNLSPRFGLVVASALLVDY
CCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
VLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAVLTAMNLRGVRESGTFFAVPTYAFM
HHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
ISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHH
GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVD
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEE
THGHAVKEQVTVVGQLARTVFYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILAR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVTALIQLYVVGVFISFTVSQTG
CCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHHHH
TFLEAVIVDVDPDATERLLERWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDM
HHHHHHEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISSVPYQLRSSAILEKRWKRNDP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCC
RSWRDPGATITPRR
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKVFQAVKRVLIGRKLESSALGETLLPKWIALPVFASDALSSVAYAPDEILITLSLAGTA
CCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
GFAFSWKIGIAVALVMLIVVMSYRQTVHAYPSGGGDYEVATVNLSPRFGLVVASALLVDY
CCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
VLTVAVSVSSGVQNAEAMIPGLAGHEGVAAAVVIAVLTAMNLRGVRESGTFFAVPTYAFM
HHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
ISVICMVVWGLTRIFVLGDNLRAPTADFTVVGAPKYTGLVGVAFVVLMARTFSSGCAALT
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHH
GVEAISNGVPSFREPKSKNAATTLAMLGGIAVSMLMGILVLASVTGVKMFDETGESHLVD
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEE
THGHAVKEQVTVVGQLARTVFYDSFKPGFYIMIVCTMIILFLAANTAFNGFPVLGSILAR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DGFLPRRLHARGDRLAYSNGILTLATGAIILVLVFNASVTALIQLYVVGVFISFTVSQTG
CCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MMRHWTRLLRTDTSAGTKERRRWQHSRIINGIGLVGTGIVLIIILASKFIHGAYLALIAM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVYVLMTSIKKHYDSVARELELNSPSDRALPSRVHAVIMISDLNKPTMRAIQFAKATVP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHHHH
TFLEAVIVDVDPDATERLLERWDEEDIDIPLRIIASPYREITNPLIDHIRRIRSENPRDM
HHHHHHEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VEVFIPEYVVGHWWEHLLHNQTALVARARLHFMPGVLISSVPYQLRSSAILEKRWKRNDP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCC
RSWRDPGATITPRR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]