| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842520
Identifier: 50842520
GI number: 50842520
Start: 1129193
End: 1129975
Strand: Direct
Name: 50842520
Synonym: PPA1037
Alternate gene names: NA
Gene position: 1129193-1129975 (Clockwise)
Preceding gene: 50842519
Following gene: 50842521
Centisome position: 44.1
GC content: 60.54
Gene sequence:
>783_bases ATGTCCATAACACCACGAAAGTGCAAGGCTGCCGCCCTTGCCACAGCGCCGGTGGCCGCTGCCCTCGGTGCTTACGGATT TCTTAAAGGGGCGACGAAGTTCTATTCCAGCCAGGTTAACGGAACTCCCGAGCAGTACAAGATGACCCTTCCTGGTGACG ACCTCGTCCCGGAAGGTTCGCCGCGCTTCAAGCGCCTCACCCATGTGGAGGATCTCGACGCCCCCTGCGACGAGGTCTGG AAGCACGTCTACCAGCTCAACACCACGACCGCCGGCTTCTACTCCTTCACCTTCTTCGAGAAGATGTTCGGACTGTCGGT CGACAACACCTTCATGGTGGAACAGGCTTGGCAGGCCCCGGACTACTACAAGCCCGGTGACATGTTCTGTTGGAGTTACG CCGGTTTCGGTGCCGAGGTCGCCGACATGGTCCCCGGCAAGTATCTGGTGTGGTTCGCTGACACCCGTGACGGCACCAGG ACACCGGGCGCAAGTTTCCTGCTACCGCCTGGAATGCCGTGGAACCGCTGGAGTTGGGTCATCGCCCTGGAACCCCTCGA CAGTGGCAACCGGACGCGCATCTACTCCCGGTGGAACATCTCGGCCTCCGAGGAGTCCAGTCCGATCTCGGTCTTCCTCA TGGATCTGGTCATGATGGACGGCGGCGGCATGATGAACCGTCGGATGTTCCAAGGGCTGGAGAAGGCTGCCGTCGGAACT GCTCGCAAGAACATCGTTCCTGCGCGCCTATCAGCGGTTCATGGGCAAGTCCTACGGCACTGA
Upstream 100 bases:
>100_bases AAATTTATTTATTTCTTGTGTCGATGCGCCACGACGACGTAGTGGGACCGGCTCAGGGGATGACGACCCGGTCCCGGGCC GTGAGTCACGAAGGAGTGCC
Downstream 100 bases:
>100_bases CGACGACCTGCAGTACCGCGTTCCGTACCCGGAGATCCGCTGGTCCCGCGACTTCCCTCGAGTGGCCAGCGAACGGGCCT CCTTCACCGAGGATCCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGSPRFKRLTHVEDLDAPCDEVW KHVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAPDYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTR TPGASFLLPPGMPWNRWSWVIALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGT ARKNIVPARLSAVHGQVLRH
Sequences:
>Translated_260_residues MSITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGSPRFKRLTHVEDLDAPCDEVW KHVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAPDYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTR TPGASFLLPPGMPWNRWSWVIALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGT ARKNIVPARLSAVHGQVLRH >Mature_259_residues SITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGSPRFKRLTHVEDLDAPCDEVWK HVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAPDYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTRT PGASFLLPPGMPWNRWSWVIALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGTA RKNIVPARLSAVHGQVLRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28942; Mature: 28811
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCC PRFKRLTHVEDLDAPCDEVWKHVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAP HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHCCC DYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTRTPGASFLLPPGMPWNRWSWV CCCCCCCEEEEECCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEE IALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGT EEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ARKNIVPARLSAVHGQVLRH HHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure SITPRKCKAAALATAPVAAALGAYGFLKGATKFYSSQVNGTPEQYKMTLPGDDLVPEGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCC PRFKRLTHVEDLDAPCDEVWKHVYQLNTTTAGFYSFTFFEKMFGLSVDNTFMVEQAWQAP HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHCCC DYYKPGDMFCWSYAGFGAEVADMVPGKYLVWFADTRDGTRTPGASFLLPPGMPWNRWSWV CCCCCCCEEEEECCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEE IALEPLDSGNRTRIYSRWNISASEESSPISVFLMDLVMMDGGGMMNRRMFQGLEKAAVGT EEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ARKNIVPARLSAVHGQVLRH HHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA