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The map label for this gene is 50842517

Identifier: 50842517

GI number: 50842517

Start: 1126914

End: 1127522

Strand: Direct

Name: 50842517

Synonym: PPA1034

Alternate gene names: NA

Gene position: 1126914-1127522 (Clockwise)

Preceding gene: 50842515

Following gene: 50842519

Centisome position: 44.02

GC content: 60.1

Gene sequence:

>609_bases
ATGGCAGTGACGACGAAGAGCCTCACCCGACGTGGACCATACGCTAAGGGGGTTGCTCGTAGGGCTGAGATTCTTGACGT
CGCTCTGCGGCTCTATGGCGCAAGTTCGGGGGAGCGGCCCACACTGGCCGCCATCGCTGCCGAAGTTGGGCTCACGGAGG
CAGGCGTTCTGCACTACTTCGGATCGATGGACGAATTATTCGTGGCGATTCTTGAAGCTCGTGACGCTCACGCGGTCGAT
GCTGGTGGCCTCACCGACCCTGACCATGTGTGGGCATACTTGGCTCAGACGACCCGCACTCCGGGGCTGACCAAGCTCTT
TGTCGACATGAGTGTGGCCGCCGCCGATCCCTATCACCCGGCCCATACTTTCATGGAGCGACACCGTCAGCGAGTTCACG
ACGTCGTCAGAATGGCCCTCGGGATCGACGATGAGCAGGCCATCCGACTGGTAGTTGCCGCGGCTGAGGGCTTGCAGATG
CGGTGGATACAGAACCAGGCAACTGATATCGCGGGCGATCTTGAGGCGTTAGCTCGAGTACTGACTACTCGCTCAGTGGT
CAGTAAGGAAACGTTGCCCAAGGCTCGTGACGACCTGGAATCCCAGTGA

Upstream 100 bases:

>100_bases
TTCCTTTGGTGGCTCAAAGTACACCTAAAACCTAGCACGACTTGGTATTCGCTGATGGTTGGGGAGGATAACTCTGGGAT
TTCCTCCTAAGGTTGGGTCC

Downstream 100 bases:

>100_bases
GTTGCGCGCCTGGGAATCGAAAGCGTGATTGAGCATCGGTAACTGTACGTGATCGACCCGGACTCCAGCCTGGCGGGCAC
GATTGACGAATTTCCGCACA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Type Transcriptional Regulator; Transcriptional Regulator TetR

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYFGSMDELFVAILEARDAHAVD
AGGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHPAHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQM
RWIQNQATDIAGDLEALARVLTTRSVVSKETLPKARDDLESQ

Sequences:

>Translated_202_residues
MAVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYFGSMDELFVAILEARDAHAVD
AGGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHPAHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQM
RWIQNQATDIAGDLEALARVLTTRSVVSKETLPKARDDLESQ
>Mature_201_residues
AVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYFGSMDELFVAILEARDAHAVDA
GGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHPAHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQMR
WIQNQATDIAGDLEALARVLTTRSVVSKETLPKARDDLESQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21987; Mature: 21856

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYF
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GSMDELFVAILEARDAHAVDAGGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHP
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCH
AHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQMRWIQNQATDIAGDLEALARV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LTTRSVVSKETLPKARDDLESQ
HHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
AVTTKSLTRRGPYAKGVARRAEILDVALRLYGASSGERPTLAAIAAEVGLTEAGVLHYF
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GSMDELFVAILEARDAHAVDAGGLTDPDHVWAYLAQTTRTPGLTKLFVDMSVAAADPYHP
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCH
AHTFMERHRQRVHDVVRMALGIDDEQAIRLVVAAAEGLQMRWIQNQATDIAGDLEALARV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LTTRSVVSKETLPKARDDLESQ
HHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA