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The map label for this gene is nrdR

Identifier: 50842508

GI number: 50842508

Start: 1110246

End: 1110755

Strand: Direct

Name: nrdR

Synonym: PPA1025

Alternate gene names: 50842508

Gene position: 1110246-1110755 (Clockwise)

Preceding gene: 50842507

Following gene: 50842509

Centisome position: 43.36

GC content: 57.06

Gene sequence:

>510_bases
ATGATGCGCTGCCCGTTCTGTCAGCATGATGACTCTCGAGTCCTGGATTCGCGGGTATGCGAAGACGGTACTGCGATCCG
TCGGAGGCGGCAGTGCCCGATGTGTGAACGACGGTTTACGACCATCGAACGCATGCAGATGACAGTTCACAAGCGCAACG
GCATCGAGGAGCCCTTCTCCCGTGACAAGGTGATCCGTGGTGTGCGCAACGCATGCAAGGGACGCCCGGTCACAGATGCC
GATCTAGCTTTGCTGGGACAACGCGTCGAGGACGGTCTACGGGCCCGAGGAGTCGCGGAGATACCCAGCGAGGAAATCGG
GTTGGCGATCTTGGGGCCACTGCGTGAACTTGATTCCATCGCCTACCTGAGGTTTGCCAGCGTTTACTTGAACTACAACA
CCATCGAGGACTTCGCTACTGAGATTGATCGGTTGCGCGACGAATCCTCCGATAAAACGAAGTCCTCGAGTCGTAAACGG
CTTTCAAAGCAGGACGAGCCACTGTTCTGA

Upstream 100 bases:

>100_bases
TGATCCCTATAAGTTGTGTTTTTGGCCCCAGTTAGGAGTAGTCTTCCAGAGCGACGGTAAGCCAGCTGTTCGGAACCTCG
TGAGGTTGGGGAAGGAGGCG

Downstream 100 bases:

>100_bases
CGAGCTGTGTGCCGAGCGTGCCACAGTTCGCACTAAGTACCGACACCAACCACCCGTATCACTGAAAATTCAGAGGGAGC
CATGACTGAGACCAAGTCCG

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MMRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFSRDKVIRGVRNACKGRPVTDA
DLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSIAYLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKR
LSKQDEPLF

Sequences:

>Translated_169_residues
MMRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFSRDKVIRGVRNACKGRPVTDA
DLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSIAYLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKR
LSKQDEPLF
>Mature_169_residues
MMRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFSRDKVIRGVRNACKGRPVTDA
DLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSIAYLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKR
LSKQDEPLF

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=149, Percent_Identity=42.2818791946309, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 19467; Mature: 19467

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFS
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
RDKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHH
AYLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKRLSKQDEPLF
HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMTVHKRNGIEEPFS
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
RDKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELDSI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHH
AYLRFASVYLNYNTIEDFATEIDRLRDESSDKTKSSSRKRLSKQDEPLF
HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA