| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is fabH1 [H]
Identifier: 50842467
GI number: 50842467
Start: 1065912
End: 1066910
Strand: Reverse
Name: fabH1 [H]
Synonym: PPA0983
Alternate gene names: 50842467
Gene position: 1066910-1065912 (Counterclockwise)
Preceding gene: 50842468
Following gene: 50842466
Centisome position: 41.67
GC content: 62.16
Gene sequence:
>999_bases ATGACGGCCATCAAGACCCGTCCCGTCCACGGCTACTCGAAATTCCTGTCCACCGGATCAGCTCGCGGATCGCGAGTAGT CACCAACAAGGAGATGTGCACGCTCATCGACTCCACCCCAGAGTGGATCGAACAGCGTACCGGCATTACCGAGCGGCGCT GGGCCACCAACTCTGAGACTGTGGCGTCCATGGGCACCACAGCCGCGCGTACCGCCCTAGAGCGATCCGGGCTGGAGGCA TCCCAGATCGATGCCATCATCGTGGCGACCGTGTCACATCATCGTCCTTCCCCCAGCTTGGCGGCTTACATCGCCCGGGA GCTCGGCTTGGGTGACGCTGCTGCGTTTGACCTCAACGGCGCATGTGCTGGGTTTTGCTACTCAACCGCTCTGGCTGACT CAATGATCCGCACCGGATCGGCGAATTACGTCCTCGTTATCGGCGTCGAGAAGCTCTCGGAAATGACGAATCTTGACGAC CGCTCCACCGCCTTCCTCTTCTCTGACGGGGCTGGTGCCGCAATCATCGGTGCCAGCGATGAGCCGGGGATCGGCCCGGT GGTGTGGGGATCTCGCTCTGATCAGCTCAAAACTATCGAGCTCGAGGACTGGCCGACGGCTAGCGCTGATCCCAACAAGA TTCACCCCCTCATTCGCATGGAAGGTCGCGCGGTCTTCAAGTGGGCTATGACTGACGTCGCCAAGCGCGCCGCCGAGGCC ATCGCCGAGGCCGGAATCACCCCCGCCGACCTCGATGTCTTCATCCCCCATCAGGCTAACGACCGGATTACCGACGTCGT GTCCCGCCACCTCAAGCTGCCTGAGTCAGTGACGGTGTGTCACGACATCGCGGATATGGGAAACACCTCCGCCGCATCCG TGCCGATCGCTATTGACCGTATGCTTCAGCGTGGACAGGCCCACAGCGGGGACCTCGCCCTCATCATCGGATTCGGAGCC GGGCTGGTCTACGCCGGCCAAGTCATCCGCCTCCCCTGA
Upstream 100 bases:
>100_bases AGCGCAACTTGAAGGGAGTGGAGTTGTTCAACCTCAACACCCCCGATCAGATCCCGGCTGCCCGCGAGTTCATCACGACT CACTCCAGCAAGGAGAATGC
Downstream 100 bases:
>100_bases ACCCCACGTTCATCACGAGAAAAACACCCACAGACTTCGGGCGCACAGCCCGAGGATAACGACAAGAAGAGGAACAATCA TCATGGCTGACAAAGACCAG
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III protein 1; Beta-ketoacyl-ACP synthase III 1; KAS III 1 [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSETVASMGTTAARTALERSGLEA SQIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNGACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDD RSTAFLFSDGAGAAIIGASDEPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEA IAEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDRMLQRGQAHSGDLALIIGFGA GLVYAGQVIRLP
Sequences:
>Translated_332_residues MTAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSETVASMGTTAARTALERSGLEA SQIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNGACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDD RSTAFLFSDGAGAAIIGASDEPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEA IAEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDRMLQRGQAHSGDLALIIGFGA GLVYAGQVIRLP >Mature_331_residues TAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSETVASMGTTAARTALERSGLEAS QIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNGACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDDR STAFLFSDGAGAAIIGASDEPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEAI AEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDRMLQRGQAHSGDLALIIGFGAG LVYAGQVIRLP
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=321, Percent_Identity=38.006230529595, Blast_Score=206, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 35276; Mature: 35145
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00261 GLYCO_HORMONE_BETA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSET CCCCCCCCCCHHHHHHHCCCCCCCEEEECCHHEEEECCCHHHHHHHCCCCHHHCCCCCHH VASMGTTAARTALERSGLEASQIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNG HHHHCCHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCC ACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDDRSTAFLFSDGAGAAIIGASD CHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEECCC EPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEA CCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHH IAEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDR HHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHH MLQRGQAHSGDLALIIGFGAGLVYAGQVIRLP HHHHCCCCCCCEEEEEECCCCHHHCCEEEECC >Mature Secondary Structure TAIKTRPVHGYSKFLSTGSARGSRVVTNKEMCTLIDSTPEWIEQRTGITERRWATNSET CCCCCCCCCHHHHHHHCCCCCCCEEEECCHHEEEECCCHHHHHHHCCCCHHHCCCCCHH VASMGTTAARTALERSGLEASQIDAIIVATVSHHRPSPSLAAYIARELGLGDAAAFDLNG HHHHCCHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCC ACAGFCYSTALADSMIRTGSANYVLVIGVEKLSEMTNLDDRSTAFLFSDGAGAAIIGASD CHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEECCC EPGIGPVVWGSRSDQLKTIELEDWPTASADPNKIHPLIRMEGRAVFKWAMTDVAKRAAEA CCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHH IAEAGITPADLDVFIPHQANDRITDVVSRHLKLPESVTVCHDIADMGNTSAASVPIAIDR HHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHH MLQRGQAHSGDLALIIGFGAGLVYAGQVIRLP HHHHCCCCCCCEEEEEECCCCHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]