Click here to switch to the map view.

The map label for this gene is 50842415

Identifier: 50842415

GI number: 50842415

Start: 1012933

End: 1013751

Strand: Reverse

Name: 50842415

Synonym: PPA0931

Alternate gene names: NA

Gene position: 1013751-1012933 (Counterclockwise)

Preceding gene: 50842417

Following gene: 50842407

Centisome position: 39.6

GC content: 57.88

Gene sequence:

>819_bases
ATGTCCAGCTCGGAAGTAGCAAGAGTCACGGAAACCTCCTGTGGGCATGACCGTCATCTCGATGATATGCGCCAACACGG
TTACCATTTCGCCGTGACGTCACACTCCACCAGCCTCAGATCATCCGCGGCAGCCCGCCCTGCGTATGCCGATCGAGGGT
CGGGGCACTACGACATCCTGCTCACCCTCATGTGCGTTGTCGTCATCCTGTCGAATATCGGCGGTTCAAAAGGGGTGCAG
CTCGGCCCCATCACCACCGATGGCGGCTTTTTCTTGTTCCCGCTGGCCTATGTCATGGGAGATATCACCACCGAAATCTA
CGGGATCAAGGCAGCACGCCGCGCGATCGTCATGGGGTTTATCTGCGCGATCCTCTCTGTACTGTGCTTCTGGGCTATCA
TCGCCCTTCCTGGATTCACCGATCCCTACTCGGTAGCCCATGACACCGCCCTAAAAATGGCCCTCGGTCCGCTATGGCAG
ATGGTGCTCGCCGGAGCATGTGGATTTCTGGCCGGACAGTTTACAAACTCGGTCATCATGGTTCGACTCAAGGCCAAGTG
GTTAGAGCGCGGTCTGGTCGGCCGACTGATGGGATCCACCGGTGCTGGCGAGGCCGTTGACACCATCATCTTCTGCGCGA
TCGCGGCACCTGTCGTCGGAATCACCAGCTTCGGCCAATGGTGCAACTACGCCTTCTTCGGGTTCTTGTGGAAAACCCTT
GTCGAGTACGCCTGCATCCCCATCACGACTCGGATCATCGCCTGGATCAAAAAACACGAGCCAAGTTATCAGGAGAGGCT
GGCAGTGGCCCGGAACTGA

Upstream 100 bases:

>100_bases
GTTGCCGCACTGTTCGACGTAGAGCTGCTGACCGTCACCCACGTCAACCATCTGGGTGTCATAGGGCTCAATCGGCGGAT
AGAGATCCCGGTGCGGGGTG

Downstream 100 bases:

>100_bases
CGCGATACCTCTGAATCATTGTCTCCATTCCTGCCAAGAAATGTCGATGGTGATGTTGCCGCCCGGTTTTCAGACCACTT
CTTGGCAGGTATGGATGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSSSEVARVTETSCGHDRHLDDMRQHGYHFAVTSHSTSLRSSAAARPAYADRGSGHYDILLTLMCVVVILSNIGGSKGVQ
LGPITTDGGFFLFPLAYVMGDITTEIYGIKAARRAIVMGFICAILSVLCFWAIIALPGFTDPYSVAHDTALKMALGPLWQ
MVLAGACGFLAGQFTNSVIMVRLKAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTL
VEYACIPITTRIIAWIKKHEPSYQERLAVARN

Sequences:

>Translated_272_residues
MSSSEVARVTETSCGHDRHLDDMRQHGYHFAVTSHSTSLRSSAAARPAYADRGSGHYDILLTLMCVVVILSNIGGSKGVQ
LGPITTDGGFFLFPLAYVMGDITTEIYGIKAARRAIVMGFICAILSVLCFWAIIALPGFTDPYSVAHDTALKMALGPLWQ
MVLAGACGFLAGQFTNSVIMVRLKAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTL
VEYACIPITTRIIAWIKKHEPSYQERLAVARN
>Mature_271_residues
SSSEVARVTETSCGHDRHLDDMRQHGYHFAVTSHSTSLRSSAAARPAYADRGSGHYDILLTLMCVVVILSNIGGSKGVQL
GPITTDGGFFLFPLAYVMGDITTEIYGIKAARRAIVMGFICAILSVLCFWAIIALPGFTDPYSVAHDTALKMALGPLWQM
VLAGACGFLAGQFTNSVIMVRLKAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTLV
EYACIPITTRIIAWIKKHEPSYQERLAVARN

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29525; Mature: 29394

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSEVARVTETSCGHDRHLDDMRQHGYHFAVTSHSTSLRSSAAARPAYADRGSGHYDIL
CCCCHHHHHHHCCCCCCCCHHHHHHCCEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHH
LTLMCVVVILSNIGGSKGVQLGPITTDGGFFLFPLAYVMGDITTEIYGIKAARRAIVMGF
HHHHHHHHHHHHCCCCCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICAILSVLCFWAIIALPGFTDPYSVAHDTALKMALGPLWQMVLAGACGFLAGQFTNSVIM
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VRLKAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTL
EEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYACIPITTRIIAWIKKHEPSYQERLAVARN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
SSSEVARVTETSCGHDRHLDDMRQHGYHFAVTSHSTSLRSSAAARPAYADRGSGHYDIL
CCCHHHHHHHCCCCCCCCHHHHHHCCEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHH
LTLMCVVVILSNIGGSKGVQLGPITTDGGFFLFPLAYVMGDITTEIYGIKAARRAIVMGF
HHHHHHHHHHHHCCCCCCCEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICAILSVLCFWAIIALPGFTDPYSVAHDTALKMALGPLWQMVLAGACGFLAGQFTNSVIM
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VRLKAKWLERGLVGRLMGSTGAGEAVDTIIFCAIAAPVVGITSFGQWCNYAFFGFLWKTL
EEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYACIPITTRIIAWIKKHEPSYQERLAVARN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA