| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842351
Identifier: 50842351
GI number: 50842351
Start: 944352
End: 945068
Strand: Direct
Name: 50842351
Synonym: PPA0865
Alternate gene names: NA
Gene position: 944352-945068 (Clockwise)
Preceding gene: 50842350
Following gene: 50842352
Centisome position: 36.88
GC content: 53.84
Gene sequence:
>717_bases GTGAGGACAGACATTCCCGTAATGAATGCCATTCTGTGTGGAATTTCTGGTTTGAGGCCGAGAGTTGCGGAGCTCCGGCT GAATCATGTACCAGGAGAACTTGAAGGTGACCTGATCGGCGAGTTCTCGGGGCCAGTTACTCCGGATGAAGGATCACCTT GTCTGCCGTGCAAGAGCTTCCCCGAATTCTTGCAGACAAGGAGGTCGGTATCCCATTTTAGAGACGAGGCGGTTGACGCA CGCTGCGTCATCCATGCAGTGGCTCAGGCTCTTGAGGATGATGAGCGACTGTGGGGGTGCTCAGAGACCGCTGGTCTTCT TGAGGCGTTTGTCTTTGTGCTTCGAGATAGTGTTGGCGGTCCTGGACCGGGGATCTATCAGGTGCGGCGCGATTCTGCGG TGAGAATGACAACTGCCGCTGAACTTGGCGATCCGATTCGATTCGGTGTTCAGGAGGAATTCTTCGCAGGGTCAGGGGTA GTTATCTTTTGCGCGAATCTGGACGTGGAGGATGGCGCCGGAGGAGCAAACGGATACTTAGTTAATACTCTCCGAGCTTC CATGGCACTCTACGAAGTCCATGTTGAACTCGGTTGCATGGACGTGGTTGGCTCCGTTTTCGGAGGCTTCATTCCAGCTT CGCTGCGATCGCTCCTGTTGGCAGATATGGTTACTCGTCAGCAAATCATCTCTTGCTCCTATGGTTTTCCAGCCTAA
Upstream 100 bases:
>100_bases GCGCTGACCTCGACGCTGGGTCTATTAGCGAGATGCTGCATCTTTCAAGTGCGCGTGAGCCTATTATTGGAGTTTCAGTG CTGGGAAAGGGGCAACGAGG
Downstream 100 bases:
>100_bases CTTGCTCGACCCGCCAGTAGCTGGGTTGTGAATTGGGTAATGAATGGATCGAAATAATTTGTACCATCTGAGTCGCGAGA AGGTAAATACAAATGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MRTDIPVMNAILCGISGLRPRVAELRLNHVPGELEGDLIGEFSGPVTPDEGSPCLPCKSFPEFLQTRRSVSHFRDEAVDA RCVIHAVAQALEDDERLWGCSETAGLLEAFVFVLRDSVGGPGPGIYQVRRDSAVRMTTAAELGDPIRFGVQEEFFAGSGV VIFCANLDVEDGAGGANGYLVNTLRASMALYEVHVELGCMDVVGSVFGGFIPASLRSLLLADMVTRQQIISCSYGFPA
Sequences:
>Translated_238_residues MRTDIPVMNAILCGISGLRPRVAELRLNHVPGELEGDLIGEFSGPVTPDEGSPCLPCKSFPEFLQTRRSVSHFRDEAVDA RCVIHAVAQALEDDERLWGCSETAGLLEAFVFVLRDSVGGPGPGIYQVRRDSAVRMTTAAELGDPIRFGVQEEFFAGSGV VIFCANLDVEDGAGGANGYLVNTLRASMALYEVHVELGCMDVVGSVFGGFIPASLRSLLLADMVTRQQIISCSYGFPA >Mature_238_residues MRTDIPVMNAILCGISGLRPRVAELRLNHVPGELEGDLIGEFSGPVTPDEGSPCLPCKSFPEFLQTRRSVSHFRDEAVDA RCVIHAVAQALEDDERLWGCSETAGLLEAFVFVLRDSVGGPGPGIYQVRRDSAVRMTTAAELGDPIRFGVQEEFFAGSGV VIFCANLDVEDGAGGANGYLVNTLRASMALYEVHVELGCMDVVGSVFGGFIPASLRSLLLADMVTRQQIISCSYGFPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25527; Mature: 25527
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDIPVMNAILCGISGLRPRVAELRLNHVPGELEGDLIGEFSGPVTPDEGSPCLPCKSF CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHH PEFLQTRRSVSHFRDEAVDARCVIHAVAQALEDDERLWGCSETAGLLEAFVFVLRDSVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PGPGIYQVRRDSAVRMTTAAELGDPIRFGVQEEFFAGSGVVIFCANLDVEDGAGGANGYL CCCCCEEEECCCCEEEHHHHHCCCCHHCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCHH VNTLRASMALYEVHVELGCMDVVGSVFGGFIPASLRSLLLADMVTRQQIISCSYGFPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRTDIPVMNAILCGISGLRPRVAELRLNHVPGELEGDLIGEFSGPVTPDEGSPCLPCKSF CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHH PEFLQTRRSVSHFRDEAVDARCVIHAVAQALEDDERLWGCSETAGLLEAFVFVLRDSVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PGPGIYQVRRDSAVRMTTAAELGDPIRFGVQEEFFAGSGVVIFCANLDVEDGAGGANGYL CCCCCEEEECCCCEEEHHHHHCCCCHHCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCHH VNTLRASMALYEVHVELGCMDVVGSVFGGFIPASLRSLLLADMVTRQQIISCSYGFPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA