| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842346
Identifier: 50842346
GI number: 50842346
Start: 938791
End: 939744
Strand: Direct
Name: 50842346
Synonym: PPA0860
Alternate gene names: NA
Gene position: 938791-939744 (Clockwise)
Preceding gene: 50842345
Following gene: 50842347
Centisome position: 36.67
GC content: 55.56
Gene sequence:
>954_bases TTGAACTGTGTGCCGAGTGACAGCGCAAGCATGTCTGATCCTGGCGGCTGGCGGGCGCTCCATATTCACTTGCCTCCCTC GGTGCAGTCCGAGTACCTAGCTGACGTGATTCTTCCCTCGATGTCAGCCTTGATGCCAGAACATGACTACTTCTTCCTCC GATATTGGCAGGGGGGATCACATCTCCGGCTTCGGCTCCGTAGCACTCCCGAGCGCCCCCTAGATGATGAGGCTATCAAC GAGGTTGCATGCCATCTCCGTAGCCTTCTCCCGGCGTTGTCAGACCAAAAGCGCGCGGAGTACCGCTATTCGCAATCGCT TCAGGATCAGTTAGCCGAAATGGAAAGGGCTGATTGCCTTCCCCTAGAGGCGGTTGGGACCGTGGTAGAGCGCCGGTACC AGCCTGAATATAGAAAGTATGGCGGATCGGTCGGAGTATCCATTGCAGAGGATGTTTTCTGTAGTACTAGCCGATCTGTC CTTCGCATTCTAAGTGAGCGACCAACTAGCCACCGACAGCCCTTGGGGTATGCTTGCCAAGTTTTCATCCAGATGCTGGG CTGCTTAGGGCTCGCAACTTCGCAGGTTGACCAGTTCCTCACCAGATATGCGCAGTGGTGGACCCCTTACTCAATGGCCG CTCGCCCTGAGATCTTAGCGGCGCGTCTCTACGCCAACTTGTCAAGCGTGGTGGCGGACCTATGGGCCGCAAGTGAGCCC AACGGAATGTTCTCGGTTCCGGCTCTCAATGCTTATACCCAATGGTCACGGCGACGGTCGTCCGCGAGAAATACCAGCGT AAAGATAGACCCAATGTTTCTATCTTGCTTAGCGAACTACATTCACACAACCAATAACCGACTTGGGCTCCCACCCGCCC TAGAATCGACAGCGGCATATCTTGTCCAACTTGGATTCCGATCGGTGGCTGTCAGGGGGGAGAAAGTGCGATGA
Upstream 100 bases:
>100_bases TCCAGGCCCGAACTATATGTCACGTTTTCCGAGTTCCTCCCATCGGAGGCCGATTACACGCAGAACGGAAGCTGCCCCAG TTACGCAGAGGAGTACTTCA
Downstream 100 bases:
>100_bases ATCCAAAAAACTCCAAAGTGACGGAACTTTGGTTTCCAGATAATTCAGACTCGCCATGTACTCTTCTTCTCGACTTATCT CGGGCCTCCGCTGAGGGCAC
Product: putative lanthionine biosynthesis protein
Products: NA
Alternate protein names: Lantibiotic Biosynthesis Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNCVPSDSASMSDPGGWRALHIHLPPSVQSEYLADVILPSMSALMPEHDYFFLRYWQGGSHLRLRLRSTPERPLDDEAIN EVACHLRSLLPALSDQKRAEYRYSQSLQDQLAEMERADCLPLEAVGTVVERRYQPEYRKYGGSVGVSIAEDVFCSTSRSV LRILSERPTSHRQPLGYACQVFIQMLGCLGLATSQVDQFLTRYAQWWTPYSMAARPEILAARLYANLSSVVADLWAASEP NGMFSVPALNAYTQWSRRRSSARNTSVKIDPMFLSCLANYIHTTNNRLGLPPALESTAAYLVQLGFRSVAVRGEKVR
Sequences:
>Translated_317_residues MNCVPSDSASMSDPGGWRALHIHLPPSVQSEYLADVILPSMSALMPEHDYFFLRYWQGGSHLRLRLRSTPERPLDDEAIN EVACHLRSLLPALSDQKRAEYRYSQSLQDQLAEMERADCLPLEAVGTVVERRYQPEYRKYGGSVGVSIAEDVFCSTSRSV LRILSERPTSHRQPLGYACQVFIQMLGCLGLATSQVDQFLTRYAQWWTPYSMAARPEILAARLYANLSSVVADLWAASEP NGMFSVPALNAYTQWSRRRSSARNTSVKIDPMFLSCLANYIHTTNNRLGLPPALESTAAYLVQLGFRSVAVRGEKVR >Mature_317_residues MNCVPSDSASMSDPGGWRALHIHLPPSVQSEYLADVILPSMSALMPEHDYFFLRYWQGGSHLRLRLRSTPERPLDDEAIN EVACHLRSLLPALSDQKRAEYRYSQSLQDQLAEMERADCLPLEAVGTVVERRYQPEYRKYGGSVGVSIAEDVFCSTSRSV LRILSERPTSHRQPLGYACQVFIQMLGCLGLATSQVDQFLTRYAQWWTPYSMAARPEILAARLYANLSSVVADLWAASEP NGMFSVPALNAYTQWSRRRSSARNTSVKIDPMFLSCLANYIHTTNNRLGLPPALESTAAYLVQLGFRSVAVRGEKVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35612; Mature: 35612
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCVPSDSASMSDPGGWRALHIHLPPSVQSEYLADVILPSMSALMPEHDYFFLRYWQGGS CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC HLRLRLRSTPERPLDDEAINEVACHLRSLLPALSDQKRAEYRYSQSLQDQLAEMERADCL EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC PLEAVGTVVERRYQPEYRKYGGSVGVSIAEDVFCSTSRSVLRILSERPTSHRQPLGYACQ CHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHH VFIQMLGCLGLATSQVDQFLTRYAQWWTPYSMAARPEILAARLYANLSSVVADLWAASEP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC NGMFSVPALNAYTQWSRRRSSARNTSVKIDPMFLSCLANYIHTTNNRLGLPPALESTAAY CCEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LVQLGFRSVAVRGEKVR HHHHHHHHHHCCCCCCC >Mature Secondary Structure MNCVPSDSASMSDPGGWRALHIHLPPSVQSEYLADVILPSMSALMPEHDYFFLRYWQGGS CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC HLRLRLRSTPERPLDDEAINEVACHLRSLLPALSDQKRAEYRYSQSLQDQLAEMERADCL EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC PLEAVGTVVERRYQPEYRKYGGSVGVSIAEDVFCSTSRSVLRILSERPTSHRQPLGYACQ CHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHH VFIQMLGCLGLATSQVDQFLTRYAQWWTPYSMAARPEILAARLYANLSSVVADLWAASEP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC NGMFSVPALNAYTQWSRRRSSARNTSVKIDPMFLSCLANYIHTTNNRLGLPPALESTAAY CCEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LVQLGFRSVAVRGEKVR HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA