| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is gpmB [H]
Identifier: 50842324
GI number: 50842324
Start: 919101
End: 919688
Strand: Direct
Name: gpmB [H]
Synonym: PPA0838
Alternate gene names: 50842324
Gene position: 919101-919688 (Clockwise)
Preceding gene: 50842323
Following gene: 50842326
Centisome position: 35.9
GC content: 61.39
Gene sequence:
>588_bases ATGCCGTTGGATGAGGTGGGGCGCCGTCAGGCATTTACGGTGGCTCAAGTCATTGCCGCGATGGAACCTGACGCGATCAT CGCTTCTCCGCTACAACGTGCGCGCGACACAGCTCAGGCAATCGGCGCTTGTGCTGGATTGGGCGTGCAGTTGGATGATC GACTCATCGAGATCGATGTCGGACGTTGGTCGGGACAACGGGCTGCGGACCTGCGTCGCAACGACCCTGAGTACGCAGCA GGTGTGGTCAGCCCTATCGATTACCGGCGCGCCGATGGGGAGACGGCGAGCGAGGTCGCGGATCGAATCGTTGCCGTGTG TCAGGACGTTGTCGCGCAGTACGCCGGAGGAACGATCATCCTCGTGGCCCACGGGTTTGCGCTGCGGACCGGAATCTGCT GGCTGCTCGGCGGCGACTATGGCGCCTCACGATGCTTGGGCGGTCTTGATAACTGTTCATGGTCGATTGTTGACCACCTG CCGGAGGACGTCGTCGAGGCTAGAGGGTTCCTTTCACCATGGCGTCTCATGGCCTATAACTGTGGTGTCCCGGTGCCCGT GGACGTCGATTTTGCAAAGGGGGCATGA
Upstream 100 bases:
>100_bases TAGGGACAGACGCGCAGTGAGCGATCGAACGCGTCTCGTGTTCGTGCGGCACGGCAGGACGGCGTTCAATGTAGAGGGTC GGCTCCAGGGCCGTCTCGAC
Downstream 100 bases:
>100_bases TCCGCTAAAGTTCTACGAGTCGCCCGGGGACGGGAGATACTTGAGACTCGCTCTACGAGCGGGTTTCTGGGGCATTGGCG CAGTTGGTAGCGCGCTTCCA
Product: phosphoglycerate mutase/fructose-2,6-bisphosphatase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDVGRWSGQRAADLRRNDPEYAA GVVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTIILVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHL PEDVVEARGFLSPWRLMAYNCGVPVPVDVDFAKGA
Sequences:
>Translated_195_residues MPLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDVGRWSGQRAADLRRNDPEYAA GVVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTIILVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHL PEDVVEARGFLSPWRLMAYNCGVPVPVDVDFAKGA >Mature_194_residues PLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDVGRWSGQRAADLRRNDPEYAAG VVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTIILVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHLP EDVVEARGFLSPWRLMAYNCGVPVPVDVDFAKGA
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=159, Percent_Identity=32.0754716981132, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 20799; Mature: 20668
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDV CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEC GRWSGQRAADLRRNDPEYAAGVVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTII CCCCCCHHHHHCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE LVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHLPEDVVEARGFLSPWRLMAYN EEECCHHHHHCEEEEECCCCCHHHHHCCCCCCCHHHHHHCHHHHHHHHCCCCHHHHHHCC CGVPVPVDVDFAKGA CCCCCCCCCCCCCCC >Mature Secondary Structure PLDEVGRRQAFTVAQVIAAMEPDAIIASPLQRARDTAQAIGACAGLGVQLDDRLIEIDV CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEC GRWSGQRAADLRRNDPEYAAGVVSPIDYRRADGETASEVADRIVAVCQDVVAQYAGGTII CCCCCCHHHHHCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE LVAHGFALRTGICWLLGGDYGASRCLGGLDNCSWSIVDHLPEDVVEARGFLSPWRLMAYN EEECCHHHHHCEEEEECCCCCHHHHHCCCCCCCHHHHHHCHHHHHHHHCCCCHHHHHHCC CGVPVPVDVDFAKGA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA