| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842311
Identifier: 50842311
GI number: 50842311
Start: 903944
End: 905896
Strand: Direct
Name: 50842311
Synonym: PPA0824
Alternate gene names: NA
Gene position: 903944-905896 (Clockwise)
Preceding gene: 50842310
Following gene: 50842312
Centisome position: 35.31
GC content: 58.12
Gene sequence:
>1953_bases GTGAATACCCAGGATCTTCTTGGACGGATTGAACCGCTGCTGTCCCGAGTTAATAAGCCCATCCAGTATGTGGGCGGGGA GTACAACAGCATCGTCAAGGAATGGCAGGACGTTGATGTCCGCTGGGTCTTGATGTATCCCGATGCGTATGAGGTTGGCC AGCCTAACCAGGGCGTGGCCATCCTCTACGAGGTGCTCAATGAGCGTGATTGGATCTTGGCTGAGCGCACCTATTCGGTG TGGCCGGATATGGAGAAGCAAATGAGGGCGGCCGGGATCCCCCAGTTCACTCTCGACGGACACCGGCCAGTTCGCGATTT CGACATCATGTCGGTCTCCCTCTCTACGGAATTGGGCTACACCAACATGCTCAACGCCATTGACCTGGCCGGTATCCCTG TTCGTCAAGCTGACCGCACCGACACCGACCCCATCGTCCTTATTGGTGGTCACGCCGCGTTTAACCCCGAGCCGGTAGCT GATTTCATCGATGCTGCTGTTCTCGGTGACGGTGAAGAGGCTTGTTTGGAGATTTCCGAGATCATCCGAGACTGGAAGAA AGAGGGTTGCCCTGGGGGTCGTGAAGGCCTGCTTGTGAGGCTTGCCGCAACAGGTGGGATCTACGTGCCGTCCTTTTATG ACGTCGAGTACCTCGACGACGGGACTATTGGCAAGGTCGCCCCAAATCGTCTAGAGGCTCCTTATACCGTTTCCAAGCAC ACCGTCATGGATCTCGACGAGTGGCAGTATCCGAAACGTCCCATCGTGCCGGTGGCTGAAACTGTCCATGAGCGTTATTC GGTGGAAATCTTCCGGGGTTGTACCCGTGGTTGTCGGTTCTGTCAGGCGGGTATAATCACCCGTCCGGTGCGAGAGCGGT CGATCGACGCCATCGCCCAGATGGTCGATGGCGGACTGCAGGCTACCGGCCTGGAAGAAGTCGGGCTGTTGAGTCTGTCT AGCGCCGACCACTCGGAGATTTCCGACATCACCAAGGGGCTAGCTGATCGGTATGAAGGGACGAACGTTTCCCTGTCCCT GCCAAGCACCCGTGTCGATACTTTCAATATCGACCTAGCAAACGAGTTGAGCCGTAACGGTCGTCGTTCCGGTCTGACCT TCGCTCCTGAAGGCGGATCGGAGCGAATGCGTCGGGTTATCAATAAGCAGGTGACCGAGGAAGATCTCATTCGTACAGTT GCTACGGCCTTCGGAAACGGGTGGCGTCAGGTCAAGCTGTATTTCATGTGCGGTCTGCCCACGGAGACTGACGAGGACGT GTTGGGGATTTACGACATGGCGTCCCACGTCATTGCGACTGGTCGAGCCGCTGCCGGGCGCAAAGATATTCGCTGCACGA TCTCCATTGGTGGGTTCGTGCCCAAGCCTCACACTCCGTTCCAGTGGGCTGCTCAAGCCTCTGCTGACGAGGTTGATCAT CGTTTGTCGGTGCTGCGCGATTCCATCCGCGCCGATCGTCAGTTTGGTCGGTCGATAGGCATGCGCTACCACGACGGACG CCCAGGAATCATTGAGGGGTTGCTTTCGCGCGGTGACCGCCGTGTTGGCAACGTCATTGAGGCTGTGTGGCGCGACGGGG GAGTTTTTGACGGCTGGAATGAGTACTTCTCTTACGATCGCTGGGTTGCCTGCTGCGAGCGGGAACTTGAGCCGCTAGGC GTCTCACTGGGTTGGTTTACTACCCGTGAGCGCGACTACGAGGAGGTACTGCCCTGGGATCACTTGGATTCTGGGCTTGA TCGTGACTGGCTATGGGACGACTGGCAGGATGCTCTGGACGGCGAGGCCGTCAACGACTGTCGCTGGAATCCCTGCTATG ACTGCGGGGTTTGCCCGCAGATGGGCACCGAGATTCAGGTAGGACCGTCGGGACATCCGCTGATCCCGCTGACGCCGGTG GTGCCTGATCTCGCACCGTCGAAGGAGGCGTGA
Upstream 100 bases:
>100_bases TTGTCTCGAATCCGCTGAGCGCGAGATCGGCCTCTGGTTCCCCCACCTGGTGTGATGTGTGATTCCATGATCTGGCTCTG ACCACCTAGCATGGCCGTTC
Downstream 100 bases:
>100_bases CGATGTCGAAGCGCGCGCAGCAACAGCCAGAGCAACAGGCCCCGCCGCAGCAGCGGCTCAGGATGCGGTACGCCAAGCGG GGTACTGCCAGATTCACCTC
Product: Fe-S oxidoreductase family protein 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MNTQDLLGRIEPLLSRVNKPIQYVGGEYNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVAILYEVLNERDWILAERTYSV WPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGYTNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVA DFIDAAVLGDGEEACLEISEIIRDWKKEGCPGGREGLLVRLAATGGIYVPSFYDVEYLDDGTIGKVAPNRLEAPYTVSKH TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGIITRPVRERSIDAIAQMVDGGLQATGLEEVGLLSLS SADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLANELSRNGRRSGLTFAPEGGSERMRRVINKQVTEEDLIRTV ATAFGNGWRQVKLYFMCGLPTETDEDVLGIYDMASHVIATGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWNEYFSYDRWVACCERELEPLG VSLGWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALDGEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPV VPDLAPSKEA
Sequences:
>Translated_650_residues MNTQDLLGRIEPLLSRVNKPIQYVGGEYNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVAILYEVLNERDWILAERTYSV WPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGYTNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVA DFIDAAVLGDGEEACLEISEIIRDWKKEGCPGGREGLLVRLAATGGIYVPSFYDVEYLDDGTIGKVAPNRLEAPYTVSKH TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGIITRPVRERSIDAIAQMVDGGLQATGLEEVGLLSLS SADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLANELSRNGRRSGLTFAPEGGSERMRRVINKQVTEEDLIRTV ATAFGNGWRQVKLYFMCGLPTETDEDVLGIYDMASHVIATGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWNEYFSYDRWVACCERELEPLG VSLGWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALDGEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPV VPDLAPSKEA >Mature_650_residues MNTQDLLGRIEPLLSRVNKPIQYVGGEYNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVAILYEVLNERDWILAERTYSV WPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGYTNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVA DFIDAAVLGDGEEACLEISEIIRDWKKEGCPGGREGLLVRLAATGGIYVPSFYDVEYLDDGTIGKVAPNRLEAPYTVSKH TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGIITRPVRERSIDAIAQMVDGGLQATGLEEVGLLSLS SADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLANELSRNGRRSGLTFAPEGGSERMRRVINKQVTEEDLIRTV ATAFGNGWRQVKLYFMCGLPTETDEDVLGIYDMASHVIATGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWNEYFSYDRWVACCERELEPLG VSLGWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALDGEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPV VPDLAPSKEA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 72592; Mature: 72592
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQDLLGRIEPLLSRVNKPIQYVGGEYNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVA CCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHH ILYEVLNERDWILAERTYSVWPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGY HHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCH TNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVADFIDAAVLGDGEEACLEISE HHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH IIRDWKKEGCPGGREGLLVRLAATGGIYVPSFYDVEYLDDGTIGKVAPNRLEAPYTVSKH HHHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCEEECCCCCCCCCCCCCCCCCEEECCC TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGIITRPVRERSIDAIAQ EEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH MVDGGLQATGLEEVGLLSLSSADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLA HHCCCCCCCCCHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHH NELSRNGRRSGLTFAPEGGSERMRRVINKQVTEEDLIRTVATAFGNGWRQVKLYFMCGLP HHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEECCC TETDEDVLGIYDMASHVIATGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWN HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH EYFSYDRWVACCERELEPLGVSLGWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALD HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCHHHCCCCHHHCCCCCCCCCCCCHHHHCC GEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPVVPDLAPSKEA CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MNTQDLLGRIEPLLSRVNKPIQYVGGEYNSIVKEWQDVDVRWVLMYPDAYEVGQPNQGVA CCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHH ILYEVLNERDWILAERTYSVWPDMEKQMRAAGIPQFTLDGHRPVRDFDIMSVSLSTELGY HHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCH TNMLNAIDLAGIPVRQADRTDTDPIVLIGGHAAFNPEPVADFIDAAVLGDGEEACLEISE HHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH IIRDWKKEGCPGGREGLLVRLAATGGIYVPSFYDVEYLDDGTIGKVAPNRLEAPYTVSKH HHHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCEEECCCCCCCCCCCCCCCCCEEECCC TVMDLDEWQYPKRPIVPVAETVHERYSVEIFRGCTRGCRFCQAGIITRPVRERSIDAIAQ EEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH MVDGGLQATGLEEVGLLSLSSADHSEISDITKGLADRYEGTNVSLSLPSTRVDTFNIDLA HHCCCCCCCCCHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHH NELSRNGRRSGLTFAPEGGSERMRRVINKQVTEEDLIRTVATAFGNGWRQVKLYFMCGLP HHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEECCC TETDEDVLGIYDMASHVIATGRAAAGRKDIRCTISIGGFVPKPHTPFQWAAQASADEVDH CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHH RLSVLRDSIRADRQFGRSIGMRYHDGRPGIIEGLLSRGDRRVGNVIEAVWRDGGVFDGWN HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH EYFSYDRWVACCERELEPLGVSLGWFTTRERDYEEVLPWDHLDSGLDRDWLWDDWQDALD HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCHHHCCCCHHHCCCCCCCCCCCCHHHHCC GEAVNDCRWNPCYDCGVCPQMGTEIQVGPSGHPLIPLTPVVPDLAPSKEA CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]