| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842286
Identifier: 50842286
GI number: 50842286
Start: 878852
End: 879361
Strand: Reverse
Name: 50842286
Synonym: PPA0798
Alternate gene names: NA
Gene position: 879361-878852 (Counterclockwise)
Preceding gene: 50842287
Following gene: 50842285
Centisome position: 34.35
GC content: 59.61
Gene sequence:
>510_bases GTGGAATTCTCCTACTCGATCCCAATTCCGAGTCCCGACGTGTCACGTCCAGTCCCTCGCTTGCCAGGGCAGTTGCCAAG CATCTCACCTGCAGGGGCATCCACAGCCCAGAAAGCTTCCCAACAACGCCAACAGTTGCTGATCGCGGGCCTCGGCGCGC TCGCCAGCTTACTCACTGTCGTGGCAACGTCGGTGAGCATCACCGGAATGTACAGCACTGTGCACCGGCAACGAAGCTTG GTGCGCAAACTCCATGGGTGGTCGGGGCTCTACATGTTCCGACAAGTTGTCGCATGGGAAACCGGTTTGTGGGGCACCCT GGCCATAGTTATTGCATGGCGATCGGTGACCTCATGGCAGGCTGGACGAACCGAATCCATCGCGGAGGGAAGGCGACCCC ATGACCTGCTGTCCTGGGCTTACACCGCACCGTGGGCTTGGGCAGGCACGGCAGGCGTGGGAATCGCGACTCTGAGCATT CTCTCCTATGCAGGTTCTATCGAACATTGA
Upstream 100 bases:
>100_bases CCGAACAGGGTCTGTCGGCAACGATGACCGATCCCGTGATGATCCGCGTCCCCCTCAGGACTATTGTCAGGCGATGACCT CACCACAGCGTTGACTACCG
Downstream 100 bases:
>100_bases GGACGCGCGAAGCATGACGACAATGAATGGGACGGCAACCATGAACGAGAATAGCCCCGTGTTACGGGTGGAGAACCTCT CCAAGACCTTCGGTTCCAGA
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTVVATSVSITGMYSTVHRQRSL VRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSI LSYAGSIEH
Sequences:
>Translated_169_residues MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTVVATSVSITGMYSTVHRQRSL VRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSI LSYAGSIEH >Mature_169_residues MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTVVATSVSITGMYSTVHRQRSL VRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSI LSYAGSIEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18212; Mature: 18212
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTV CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VATSVSITGMYSTVHRQRSLVRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC AGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSILSYAGSIEH CCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTV CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VATSVSITGMYSTVHRQRSLVRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC AGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSILSYAGSIEH CCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA