| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is bchH [H]
Identifier: 50842278
GI number: 50842278
Start: 872003
End: 874576
Strand: Reverse
Name: bchH [H]
Synonym: PPA0791
Alternate gene names: 50842278
Gene position: 874576-872003 (Counterclockwise)
Preceding gene: 50842279
Following gene: 50842277
Centisome position: 34.16
GC content: 54.74
Gene sequence:
>2574_bases ATGAAAATTACGTTCTTGACTGTGTTCCCCGATCTCGTGAAACATGTTTCCGAAGCAGCCAAGACCATTGATCCAAGCCA CGATCTTCTCGAACTGCATTTCTTTAACTCTACCACGAGACCCACTCCAGAAGAACTTGAGGCACTGACAAGAGCTATTC ACGACAGCGATATCGTCGTCCTTGACGCCATGGGTGGTGACCCCCAGTGGATTCGGGCTACACGATTAACTTTGGACGAC TTTGATGGGGCAGTCCTTTCTTGGGGAGCCGAGTTTATCGACAAGGTGAGATTAGGATCGTTCTCCATGGCGACAGCCCG CAATGCCATAGAAAAAACTGGCAGCCACGCTGACATGAAACACATGCCGCCAGACATGAAGTCGATGCTCGGAAACACGG GAGCCCAAAAGAGCATTAAGGGCATACTGAATAGTGCCAAAAAAATGATTCCTATCATCACAGAAATGGGGTCATCCACA GACTCTGGAAGTGAAATCTCTGGGATAAATCGCGTACATGCCACAGTGAAAGGGATGCGAACCGCACCAAAATTTATGGC CGACGCGAAGAGATTTTCCGCGCTGGGTAAAGCCTTCCACTCGATGCGAGAACCGCAAGCAGATTTTTTCCTTCGCCATC TGCTTCATTTCGACGGCGGTCACCCAGAGGTCGTTGTGCCCACACCACCCGAGGCTCTAGCCCCTGCGAGCGTCGGTGCA CCGTGGCCTAGTAGACACTTCCCCACCGTCGAAAAATACCGCCAGGAATGTGACGCTCCACACGGAAGACCCACTGTCGT CCTTCTTTACAGCGGCCTCACATATCCCTACGACAGTAACGATGTCGTACGCGCCTTAATGGATTCGTTACGTAAGGACT GCTGGGTTGTGCCCATCAGCATCGTGGCCGCCGGTGGCGAATCTTTGGAGGCTCTGCGCACACTTCTGAGCGAAGCCGCA CCAAAACTTATTATCAGCATGCAGGGCTTTCGCATTGGCGGGGGGCCGATGGGGGGTGATGTTGATTCCAGCACGGCCAT GCTCAAATCGATCAATGCCCCGATTATGCATCCCCTCATACTCTCCCGATACACCGAGAAACAATGGAACGAGTCACGAC ACGGCCTCGGTCAGAGTGAAGCCATGGTCATGCTCATGTTACCCGAAATGGACGGTTGTCTGGCCGAGATACCGATAGCG GCGATGACTGAGCCAGCTCAAAACACGGCCACGGGAGTCGTCACATCGGTACTCGTGCCAATCCCAAAGCAAATTGAAAG ATTTGCACGACGAGTTCGTGGCCAATTGAGACTATCGACAACTCCGGCTCCTCAGAAACGAATCGCACTCATTGGCTACG ATTATCCTGCAGGAGAGGGGAACCTCCTCAACGGAGCCTTTCTGGACGTCAGCGAATCTATGGCGGCAATCATGCGCGAA CTGTCGCACCGCGGCTATCAGACCAAGACCCCTAGTGGGCAACAACTTCTCAATGACTTACTGGCCCAAGCCGTAAACTC CCCTGAATATTCGCAGACTGTACGGCCGAAAACTTACCTACGCGCCGATGCCGAACAAGATCTGCCGCACCCCCGTGCGT GGCAAAGTATGGATGAAACACACCCAAGCCCAAGCGACTGCCCTATGACGACTCCTGAGGGCGATTTCATCATCCCCGCA GTCGACTACGGGAACGTCTTGGTCGGTATCCAACCAGGTCGTGGCTCAGTCAAGATGGCTACCACTGACGCCCACGACAC CACTCGTCCCCCACACCCGCAGTACGCCGGTTTCTACACATGGCTGAGCCAAGTCTGGAAACCAGACGTCATCATCCATG TCGGAACACACGGCACCTTGGAATTCCTCCAAGGTAAAGAGAACGCGGTCAGCGCGGAATGCTTCCCCGACATGCTCATC GGTGATATCCCCCACGTGTACATCTATTACTGTGGAAACGCTGCAGAGGGGCTGATTGCGCGTCGTCGCGCACACGCGGT TCTCGTGAGTTATCAACCTCCCGTGATGCAACCCACAAGACTCGACGGTGAGTTGGCAGAACTAGACGATCTCATCTCCG AATACCGACGCAGTGTCACCCTCATGCCCCAAACCAGCGCCGAGTTGTTGGAACAGGTGCACGGACGCGCCACAGCTCTA CATCTTCCGACCGATCTCGATGAACTCGAGGTAGAGCTAGCACGGACCAAGCGTTCGCTTGTCCCCATGGGTCTACACGT CTGGGGACAGGCCTATACCCCGCAGGAGGCTCGACTCATGGTGCGCGGAATGGCCGAGCACGGTTCATTTGACGGTGAAC TAGCCCCCGCACTCTCCCCTAGCGAGCAAGCCAAGGTCGTCGGCAAGGTGCTGGGAGAGGTTTCAGACTCACCCAACGAA ACATCTTTACCGAAAAATCTGTGGAACCCAAAAACCCCGAAGACGAGGCGCTCACTCAGGGAGTCGGGTACCTGGCGTCT TGGGCACGAAATCTGTACGCGCGGCTACAACACAATGACGAGATGGAAGGTTTATTCCACGCCCTCGAAGGACGTCACGT TGATGCACGCTTAG
Upstream 100 bases:
>100_bases GGCCCATCGAAGAGAACTTCGACATCGAAGCGTGGATTACGACGGATCCCCAAGGCAAGCTCCCAGTCATCCAACCACGT CGCCCCTTGAAGGAAGCACG
Downstream 100 bases:
>100_bases GTGGCGATCCCATACGTAATCCAGAAGTCTTGCCCTCGGGGCATTCGCTGTACCAGTTCGACTCACGGCGAGTACCCACC CCCATCGCAGTGCGACGAGG
Product: CobN/magnesium chelatase subunit
Products: NA
Alternate protein names: Mg-protoporphyrin IX chelatase subunit H [H]
Number of amino acids: Translated: 857; Mature: 857
Protein sequence:
>857_residues MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVVLDAMGGDPQWIRATRLTLDD FDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTGSHADMKHMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSST DSGSEISGINRVHATVKGMRTAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA PWPSRHFPTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPISIVAAGGESLEALRTLLSEAA PKLIISMQGFRIGGGPMGGDVDSSTAMLKSINAPIMHPLILSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIA AMTEPAQNTATGVVTSVLVPIPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDETHPSPSDCPMTTPEGDFIIPA VDYGNVLVGIQPGRGSVKMATTDAHDTTRPPHPQYAGFYTWLSQVWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLI GDIPHVYIYYCGNAAEGLIARRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSPSEQAKVVGKVLGEVSDSPNE TSLPKNLWNPKTPKTRRSLRESGTWRLGHEICTRGYNTMTRWKVYSTPSKDVTLMHA
Sequences:
>Translated_857_residues MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVVLDAMGGDPQWIRATRLTLDD FDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTGSHADMKHMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSST DSGSEISGINRVHATVKGMRTAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA PWPSRHFPTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPISIVAAGGESLEALRTLLSEAA PKLIISMQGFRIGGGPMGGDVDSSTAMLKSINAPIMHPLILSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIA AMTEPAQNTATGVVTSVLVPIPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDETHPSPSDCPMTTPEGDFIIPA VDYGNVLVGIQPGRGSVKMATTDAHDTTRPPHPQYAGFYTWLSQVWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLI GDIPHVYIYYCGNAAEGLIARRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSPSEQAKVVGKVLGEVSDSPNE TSLPKNLWNPKTPKTRRSLRESGTWRLGHEICTRGYNTMTRWKVYSTPSKDVTLMHA >Mature_857_residues MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVVLDAMGGDPQWIRATRLTLDD FDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTGSHADMKHMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSST DSGSEISGINRVHATVKGMRTAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA PWPSRHFPTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPISIVAAGGESLEALRTLLSEAA PKLIISMQGFRIGGGPMGGDVDSSTAMLKSINAPIMHPLILSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIA AMTEPAQNTATGVVTSVLVPIPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDETHPSPSDCPMTTPEGDFIIPA VDYGNVLVGIQPGRGSVKMATTDAHDTTRPPHPQYAGFYTWLSQVWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLI GDIPHVYIYYCGNAAEGLIARRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSPSEQAKVVGKVLGEVSDSPNE TSLPKNLWNPKTPKTRRSLRESGTWRLGHEICTRGYNTMTRWKVYSTPSKDVTLMHA
Specific function: Involved in bacteriochlorophyll pigment biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg- protoroporphyrin IX [H]
COG id: COG1429
COG function: function code H; Cobalamin biosynthesis protein CobN and related Mg-chelatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunit H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011771 - InterPro: IPR003672 - InterPro: IPR022571 [H]
Pfam domain/function: PF02514 CobN-Mg_chel; PF11965 DUF3479 [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 94210; Mature: 94210
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVV CEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEE LDAMGGDPQWIRATRLTLDDFDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTGSHADMK EECCCCCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC HMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSSTDSGSEISGINRVHATVKGMR CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCC PWPSRHFPTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPIS CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEE IVAAGGESLEALRTLLSEAAPKLIISMQGFRIGGGPMGGDVDSSTAMLKSINAPIMHPLI EEECCCHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCHHHHHH LSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIAAMTEPAQNTATGVVTSVLVP HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHC IPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE CHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDET HHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCHHCCCCCHHHHHHHHC HPSPSDCPMTTPEGDFIIPAVDYGNVLVGIQPGRGSVKMATTDAHDTTRPPHPQYAGFYT CCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHH WLSQVWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLIGDIPHVYIYYCGNAAEGLIA HHHHHCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHH RRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCHHHHHHHHCCCEEEE HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSP ECCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC SEQAKVVGKVLGEVSDSPNETSLPKNLWNPKTPKTRRSLRESGTWRLGHEICTRGYNTMT HHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCEEHHHHHHHCCCCCCE RWKVYSTPSKDVTLMHA EEEEEECCCCCEEEEEC >Mature Secondary Structure MKITFLTVFPDLVKHVSEAAKTIDPSHDLLELHFFNSTTRPTPEELEALTRAIHDSDIVV CEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEE LDAMGGDPQWIRATRLTLDDFDGAVLSWGAEFIDKVRLGSFSMATARNAIEKTGSHADMK EECCCCCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC HMPPDMKSMLGNTGAQKSIKGILNSAKKMIPIITEMGSSTDSGSEISGINRVHATVKGMR CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TAPKFMADAKRFSALGKAFHSMREPQADFFLRHLLHFDGGHPEVVVPTPPEALAPASVGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCC PWPSRHFPTVEKYRQECDAPHGRPTVVLLYSGLTYPYDSNDVVRALMDSLRKDCWVVPIS CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEE IVAAGGESLEALRTLLSEAAPKLIISMQGFRIGGGPMGGDVDSSTAMLKSINAPIMHPLI EEECCCHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCHHHHHH LSRYTEKQWNESRHGLGQSEAMVMLMLPEMDGCLAEIPIAAMTEPAQNTATGVVTSVLVP HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHC IPKQIERFARRVRGQLRLSTTPAPQKRIALIGYDYPAGEGNLLNGAFLDVSESMAAIMRE CHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LSHRGYQTKTPSGQQLLNDLLAQAVNSPEYSQTVRPKTYLRADAEQDLPHPRAWQSMDET HHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCHHCCCCCHHHHHHHHC HPSPSDCPMTTPEGDFIIPAVDYGNVLVGIQPGRGSVKMATTDAHDTTRPPHPQYAGFYT CCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHH WLSQVWKPDVIIHVGTHGTLEFLQGKENAVSAECFPDMLIGDIPHVYIYYCGNAAEGLIA HHHHHCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHH RRRAHAVLVSYQPPVMQPTRLDGELAELDDLISEYRRSVTLMPQTSAELLEQVHGRATAL HHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCHHHHHHHHCCCEEEE HLPTDLDELEVELARTKRSLVPMGLHVWGQAYTPQEARLMVRGMAEHGSFDGELAPALSP ECCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC SEQAKVVGKVLGEVSDSPNETSLPKNLWNPKTPKTRRSLRESGTWRLGHEICTRGYNTMT HHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCEEHHHHHHHCCCCCCE RWKVYSTPSKDVTLMHA EEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA