| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842273
Identifier: 50842273
GI number: 50842273
Start: 865732
End: 866931
Strand: Direct
Name: 50842273
Synonym: PPA0786
Alternate gene names: NA
Gene position: 865732-866931 (Clockwise)
Preceding gene: 50842272
Following gene: 50842282
Centisome position: 33.81
GC content: 53.08
Gene sequence:
>1200_bases GTGAAGTACTCCGGTTCTGTTCATTTTACCGGTGTTGGCGGAAGAATGGATCTTACTCTCGCCGACCCTGAGATTGTCGT TAACAATGGCGATGATCATGTGATTATGTCCGTGAAGTCCAAGACTATGGTCGGGCAGTCGGTTGACTATGGCCGTATAA CTTTCGTTGATATGACCGGCTCTATTACGCAGGGTCAAAACGATGCAGCTCAGGTTGTGGGAACCAATGTCAAGCTGAAT AGCCAAGCTGTCGATGCATTCGCTGGTTTCTATCGAGCTGGAAAGCCCATGGATGACATCGATTCGTCCTTGAAGCTTGG GCCTCAATCCTCTCGCCCGGAACCGACGGTGACTCCCAAGCCGAGTGTTACCCCTAAGCCGAGTGTTAAGCCAAAGCCGA CGGTGGCTCCCAAACCTGACCAAAGCACAATTATGGCGCCGCAGTCGGATGCTGCGACGGAGGCTGCTGCTGGTGAGGCT CCGTCCGCGGGTGCTCACAAGATTATCCGCAAGCAGGTGTGCACGGTCGTCCCTGGAGCGTCGAGGGCTACGTCACCTAC CTCTACGCCAGCCAAGGTTGGCAAGGGCAGCATGAACTGGGGGGTTTCGACCTCATTCGTCAATGCTCTCAAGGGCCCGA TGCAAGGCAAGTGGACGATGTTGGGGGGAGCCTCCGCTGATGGGACTCGGTTCAACTTCCCGTTCAGTGGGGGTAACTAC GATAGGGCCACGAAGACGGGAAATCTCAATTTTTCTGGCGGTGTTCACTTTACGGGGGTGCATGGGCTCCTTGATCTATC GCTGAGTGATCCGTCCCTTTCTTTGAAGAATGGGAAAGGCGTTATGAAGCTTACCTTGAATGCTGGAGGAATGGCACCCT TTAAAGGTAGGGTTGACTTTGCGAATGTTTCCGTTGTTCCATCCGGGTCTGGTTTTACTGCGACGTCTGTTGTTTTGACT GGGAACGGCGTACAGGTGTGGAATGGTTTCTATAAGAAGGGCCATTCAATGGATAACTTCTCTGTTTCGTTGGGGGACAA ATCGGATTCCGCGTCCGCTGCGAAGCAAAATTCTGCTTCTCTGGTGAAAAAGAGCGCTGCGTCTCCGACGAAGCGGGAAT GTCACGATGTCCTGGTTGATGCTAAGACGGGTCAGATCATATCCGGTAGCAATGGGTCACTGCCTAATACTGGTGTGTGA
Upstream 100 bases:
>100_bases TGGATCGTGGTCCACGAGTAGCGGCGCAAGTTGGAATGGCAAAGTATTTTCATTCCCGGTGAGCAAAGGCAGCTTGAGTT CCACTGCGCAGAAGGCAGAT
Downstream 100 bases:
>100_bases TGATTATTTGTTGATCAGCATGTGCTGACGACGGTGATAGGTGGGGGTCATTTGGCCCCCACCTATTTGTTGTTGCGTAT GTGGTTAGTGCCGCGTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKYSGSVHFTGVGGRMDLTLADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTGSITQGQNDAAQVVGTNVKLN SQAVDAFAGFYRAGKPMDDIDSSLKLGPQSSRPEPTVTPKPSVTPKPSVKPKPTVAPKPDQSTIMAPQSDAATEAAAGEA PSAGAHKIIRKQVCTVVPGASRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMLGGASADGTRFNFPFSGGNY DRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKGRVDFANVSVVPSGSGFTATSVVLT GNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQNSASLVKKSAASPTKRECHDVLVDAKTGQIISGSNGSLPNTGV
Sequences:
>Translated_399_residues MKYSGSVHFTGVGGRMDLTLADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTGSITQGQNDAAQVVGTNVKLN SQAVDAFAGFYRAGKPMDDIDSSLKLGPQSSRPEPTVTPKPSVTPKPSVKPKPTVAPKPDQSTIMAPQSDAATEAAAGEA PSAGAHKIIRKQVCTVVPGASRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMLGGASADGTRFNFPFSGGNY DRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKGRVDFANVSVVPSGSGFTATSVVLT GNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQNSASLVKKSAASPTKRECHDVLVDAKTGQIISGSNGSLPNTGV >Mature_399_residues MKYSGSVHFTGVGGRMDLTLADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTGSITQGQNDAAQVVGTNVKLN SQAVDAFAGFYRAGKPMDDIDSSLKLGPQSSRPEPTVTPKPSVTPKPSVKPKPTVAPKPDQSTIMAPQSDAATEAAAGEA PSAGAHKIIRKQVCTVVPGASRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMLGGASADGTRFNFPFSGGNY DRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKGRVDFANVSVVPSGSGFTATSVVLT GNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQNSASLVKKSAASPTKRECHDVLVDAKTGQIISGSNGSLPNTGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41130; Mature: 41130
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSGSVHFTGVGGRMDLTLADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTG CCCCCCEEEEEECCEEEEEECCCEEEEECCCCEEEEEEECCEEECCCCCCCEEEEEEECC SITQGQNDAAQVVGTNVKLNSQAVDAFAGFYRAGKPMDDIDSSLKLGPQSSRPEPTVTPK CCCCCCCCCHHEEECCEEECHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC PSVTPKPSVKPKPTVAPKPDQSTIMAPQSDAATEAAAGEAPSAGAHKIIRKQVCTVVPGA CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC SRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMLGGASADGTRFNFPFSGGNY CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCC DRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKGRVDF CCCEECCCCEECCCEEEEEECEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCCEEE ANVSVVPSGSGFTATSVVLTGNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQNSAS EEEEEEECCCCCEEEEEEEECCCEEEHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHH LVKKSAASPTKRECHDVLVDAKTGQIISGSNGSLPNTGV HHHHHCCCCCHHHHHHEEEECCCCCEEECCCCCCCCCCC >Mature Secondary Structure MKYSGSVHFTGVGGRMDLTLADPEIVVNNGDDHVIMSVKSKTMVGQSVDYGRITFVDMTG CCCCCCEEEEEECCEEEEEECCCEEEEECCCCEEEEEEECCEEECCCCCCCEEEEEEECC SITQGQNDAAQVVGTNVKLNSQAVDAFAGFYRAGKPMDDIDSSLKLGPQSSRPEPTVTPK CCCCCCCCCHHEEECCEEECHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC PSVTPKPSVKPKPTVAPKPDQSTIMAPQSDAATEAAAGEAPSAGAHKIIRKQVCTVVPGA CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC SRATSPTSTPAKVGKGSMNWGVSTSFVNALKGPMQGKWTMLGGASADGTRFNFPFSGGNY CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCC DRATKTGNLNFSGGVHFTGVHGLLDLSLSDPSLSLKNGKGVMKLTLNAGGMAPFKGRVDF CCCEECCCCEECCCEEEEEECEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCCEEE ANVSVVPSGSGFTATSVVLTGNGVQVWNGFYKKGHSMDNFSVSLGDKSDSASAAKQNSAS EEEEEEECCCCCEEEEEEEECCCEEEHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHH LVKKSAASPTKRECHDVLVDAKTGQIISGSNGSLPNTGV HHHHHCCCCCHHHHHHEEEECCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA