| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842264
Identifier: 50842264
GI number: 50842264
Start: 853496
End: 854272
Strand: Reverse
Name: 50842264
Synonym: PPA0777
Alternate gene names: NA
Gene position: 854272-853496 (Counterclockwise)
Preceding gene: 50842274
Following gene: 50842263
Centisome position: 33.37
GC content: 56.63
Gene sequence:
>777_bases ATGACCGATCGGTCTCCCCGACGCCAAGAACCTTCCACCGGGTCAACCCCGTCGAACAGTTCGACTACCCATGCCGGCGA CAGCGCACAGCCGGGCGGCCCGAAGTGGCGAATCGTTGCGCTCGTGGTGGTCATTGCTCTCATCATCGCCGCTATCGCCG TTATCTTCATTCAGCGCAACAATGACAGCGACTCTGCTGGTGGAGCAGCATCATCAACCACCGCGACCACGACATCTAGC ACGTCGGGCATTCCCGCCGCTTCGGCCGCGAAAAAAGGCCCGGTTCCAGCCGGCTGCATGAAAACCCCCAAGCCGATCGT GCCGGTGAAATATTCCATCGACGGGATGAAGGCGTCCGCGAAGGTACTATCCCGAGGCGTAGATGAGACTGGGGCCGCTG GGGCACCGCCAAAGAATGACCCCTCGTCAATGGCTTGGTTTAACCAAGGCCCGAAGATCGGTTCCGACAAGGGGAACGCT GTGTTGACCGCGCATACTTACCACAAGGGTGGGGCTCTTGGTAACCGCCTCTACGACAAAAACAACGGCATTAAGAAGGG CGACATTATCCGCCTGACTGACAAGACGGGGCAGACCGTGTGTTATCGCTACGATCACGACACCAAGGTCATGGTCAAGG ACTACAACCCTAATTCAAATATCCTTTACGACAACAATGGTCCGGCCCAGGCGGCCATTGTGATCTGCTGGGATTACGTC AAGAAAACTGGAGAATTTGACTCTCGCGTCATCTTCTACACATATCCAGTCGCATGA
Upstream 100 bases:
>100_bases AAGGTAGCCTACATCTGGATCCGTTCCCTCGGACCCCGTCCGCATTCGGGAAATCCATCCCGAGTCTGAACCCTCGCAAG CCCTGGAGGACATCACAGTT
Downstream 100 bases:
>100_bases TTTTTATCAGGCTCCATAATTTCATCTAAGGCCACCCTGAGGCGAGCGCGCACATTCAGCCACTTCTATTCTGAAGCTTA TGAACCGTAGTGCGCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTDRSPRRQEPSTGSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRNNDSDSAGGAASSTTATTTSS TSGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASAKVLSRGVDETGAAGAPPKNDPSSMAWFNQGPKIGSDKGNA VLTAHTYHKGGALGNRLYDKNNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYV KKTGEFDSRVIFYTYPVA
Sequences:
>Translated_258_residues MTDRSPRRQEPSTGSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRNNDSDSAGGAASSTTATTTSS TSGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASAKVLSRGVDETGAAGAPPKNDPSSMAWFNQGPKIGSDKGNA VLTAHTYHKGGALGNRLYDKNNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYV KKTGEFDSRVIFYTYPVA >Mature_257_residues TDRSPRRQEPSTGSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRNNDSDSAGGAASSTTATTTSST SGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASAKVLSRGVDETGAAGAPPKNDPSSMAWFNQGPKIGSDKGNAV LTAHTYHKGGALGNRLYDKNNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYVK KTGEFDSRVIFYTYPVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27178; Mature: 27047
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRSPRRQEPSTGSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECC NDSDSAGGAASSTTATTTSSTSGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASA CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH KVLSRGVDETGAAGAPPKNDPSSMAWFNQGPKIGSDKGNAVLTAHTYHKGGALGNRLYDK HHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEECC NNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYV CCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEHHH KKTGEFDSRVIFYTYPVA HHCCCCCCEEEEEEECCC >Mature Secondary Structure TDRSPRRQEPSTGSTPSNSSTTHAGDSAQPGGPKWRIVALVVVIALIIAAIAVIFIQRN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECC NDSDSAGGAASSTTATTTSSTSGIPAASAAKKGPVPAGCMKTPKPIVPVKYSIDGMKASA CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH KVLSRGVDETGAAGAPPKNDPSSMAWFNQGPKIGSDKGNAVLTAHTYHKGGALGNRLYDK HHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEECC NNGIKKGDIIRLTDKTGQTVCYRYDHDTKVMVKDYNPNSNILYDNNGPAQAAIVICWDYV CCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEHHH KKTGEFDSRVIFYTYPVA HHCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA