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The map label for this gene is ydiJ [C]

Identifier: 50842262

GI number: 50842262

Start: 850574

End: 853003

Strand: Reverse

Name: ydiJ [C]

Synonym: PPA0775

Alternate gene names: 50842262

Gene position: 853003-850574 (Counterclockwise)

Preceding gene: 50842263

Following gene: 50842260

Centisome position: 33.32

GC content: 60.25

Gene sequence:

>2430_bases
GTGTCAGTGGCATGCACCCTCGGCGGAGTGCTGGCCGACAACTCCTCGGGTATGAGTTGCGGCACCGTCGCCAATTCTTA
CCGCACCCTCGACTCCATGATCTTCGTGTTGGCATCAGGCACCGTCATTGACACCGCTGACCCACAATGTGAGGACAAAC
TGGCCCATGACGAGCCCGAACTCGTCGAGACACTCATGGCACTACGAGACCAATGCCGAGAGCAGGCCCGTGCCGACGAA
ATCACTTTCCAATTCTCGCGCAAGAACACGATGGGTTATGGGCTCAACGCCTTCCTCGACTACGACACTCCAGCGCAGAT
CCTCTCCCACCTCATGATCGGTTCGGAGGGGACCCTTGGATTCATCTCCTCGGCCGTTATGAACACCGTGAAGATCATGC
CAAACCTGGCCACTGCCTTGCTCCACTTCCCCACTCTTGACGCTGCCACCAAGGCACTACCAGCTTTAGTGAAATCCGGG
GTGACCGTCACTGAGCTGATGGATTCCTCGTCCCTCCAGTTGTGTCGCGATGACCCGGTCAACGGTCACATCATCCCGCC
AGCTCCCGGGAGCGGAGATGCCGCTCTTCTCGTCGAGTACCACTGCCCGGATCGAAAATCACGAAATGAGGCTGTCGCAG
CTGGCAACTCCGTCACCTCCGAACTGGATCTGGTCAATAAGCCCACGTTCACCGACGACCCCGCTGTGCGTGGCCCAATC
TGGACCCTGCGCAGTGGCCTTTATGCCAAGGTCGCCGGCACACGGCAGTCGGGCCAGACAGCCCTGCTGGAGGACATCGC
CGTTCCCGTCGAAAACCTCGCCGCGGTGTGCGAAGACCTGCAGCAACTTTTCAGCGAACACAATTACCCAGAGTCGATCA
TCTTCGGCCATGCCAAGGACGGGAACATTCACTTCCTCGTCATCGAAGACTTCCGCAACAAAGCGGGCTTGGATCGTTAC
GAAAAATTCACCGAGGACATGGTGACCCTTGTCCTCAATACCCACGGCACCCTCAAGGCCGAGCATGGCACCGGACGCAT
CATGGCGCCCTTCGTCGCACGCCAATACGGGCCTGACCTTTACCGAATCATGCGTCAGGTCAAAAAATCAGTGGACCCGG
CAGGAGTGCTCAACCGCGGCACCATCATCACCGACGACCCGAAATTGCACCTCAAGGAGGTCAAGCTCACCCCAACTGTC
CAAGATGAGGTCGATCGGTGTGTCGAATGTGGGTACTGCGAACCAGTCTGCCCGTCACGGGATCTCACATTGACGCCTCG
CCAGCGGATCGTCATGCAACGCGCCATCGCTCAAGCACGAGCTGACGGGGATGAAGTGCTCGCGACCGACCTTGAAGAGC
GTGCGACCTACCCGGTAGTGCAGACCTGTGCCGTTGACGGCATGTGCCAAACCAACTGTCCTGTACACATCAATACCGGC
GATCTGGTACGGCGACTCCGAGCCGAACATAACCCAGCAGCCTGGCAGGCCACCTGGGATCTAGCGGCTAAGGGGTGGGG
GCCCTTCGTCACGGCAGCAAGCGCCGGGATGTCAGCGATCAAACCTGTTCCCGCAGCAGCAACCAATGTCCTCACCGGAG
CTGCCCGCGCCGTCTTGGGAGCCGACCGTATTCCGCAAGTTTCCGATGAGTTGCCTGGTGGTGGTAAACGACGCAGCTCC
GGTCACCGCAGCGCCCCGCATGGACGCCCCGAGGTGGTGTACCTGCCGGCCTGTGTCAACACCATGTTCGGTGGCGTCAT
GCCGGGCGAGAAGACAACCGAGTTTGCGATAATTTCTCTGCTTACCGCGGCTGGGATCGGGGTGACTGTTCCTGAAGGGA
TCAATTCGCTGTGCTGCGGCACCCCGTGGAAATCCAAGGGGATGACACAGGGGTACGCGACGATGCGTCGTCGTGTGGTT
GACATCATGCGCCAATCTACCCGAGACGGCGAACTGACGGTGATCTCCGACGCGGTGAGTTGCTCGGAAGGCTTCGTCCA
CGAGCTCGAGTATGAGGGTGTCAAGGACATTCGAGTAGTCGATGCTGTCCAGTACGTCGCCGACGAGGTTCTGCCTATCA
TGCCGGGGCTACCCAAGGTCGCGTCGGCGGCACTCCACCCAACATGCTCGTCAACCCGGATGGACTGGAACGACTCGTTG
CAGCGCTGTGCCGAAGCGGTGGCAGACGAAGTCGTCGTCGCCGACGCCTGGGGCTGCTGCGGGTTCGCTGGGGACCGCGG
CATGCTACATCCAGAGCTCACCAAGTCAGCCACTCGCCGCGAGGCAACGGAGCTAGCAGAACGAGAATTCGACCTCTATC
TGTCCGCCAACCGCACCTGCGAACTCGGCATGGAACGAGCTACGGGCAAGCCCTGGCGTCACGCCCTCTCGGTACTCGCC
GAGCGCATGGTGGAGTATGCCCCAGCATGA

Upstream 100 bases:

>100_bases
TCGACGGCGGCCGCAAGGTTCGCGTCCAGCCTCGGGCGACGATCGTCGCCGTCAATTCCGTCCTTGCCAGGTACGGACGC
AAACTCGGCCCCGACCCGGC

Downstream 100 bases:

>100_bases
CCCCACGCATGAGAGCTTCTTCCAACGCTGCACGTCGGCACCGTTATCCACCGGGTTCACAATGGCCACTTCAATCCCGC
GTAGCTCGACGGGGAATGGC

Product: oxidoreductase, putative D-lactate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 809; Mature: 808

Protein sequence:

>809_residues
MSVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTVIDTADPQCEDKLAHDEPELVETLMALRDQCREQARADE
ITFQFSRKNTMGYGLNAFLDYDTPAQILSHLMIGSEGTLGFISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSG
VTVTELMDSSSLQLCRDDPVNGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSELDLVNKPTFTDDPAVRGPI
WTLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQLFSEHNYPESIIFGHAKDGNIHFLVIEDFRNKAGLDRY
EKFTEDMVTLVLNTHGTLKAEHGTGRIMAPFVARQYGPDLYRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTV
QDEVDRCVECGYCEPVCPSRDLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQTCAVDGMCQTNCPVHINTG
DLVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKPVPAAATNVLTGAARAVLGADRIPQVSDELPGGGKRRSS
GHRSAPHGRPEVVYLPACVNTMFGGVMPGEKTTEFAIISLLTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRRRVV
DIMRQSTRDGELTVISDAVSCSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGLPKVASAALHPTCSSTRMDWNDSL
QRCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSATRREATELAEREFDLYLSANRTCELGMERATGKPWRHALSVLA
ERMVEYAPA

Sequences:

>Translated_809_residues
MSVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTVIDTADPQCEDKLAHDEPELVETLMALRDQCREQARADE
ITFQFSRKNTMGYGLNAFLDYDTPAQILSHLMIGSEGTLGFISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSG
VTVTELMDSSSLQLCRDDPVNGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSELDLVNKPTFTDDPAVRGPI
WTLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQLFSEHNYPESIIFGHAKDGNIHFLVIEDFRNKAGLDRY
EKFTEDMVTLVLNTHGTLKAEHGTGRIMAPFVARQYGPDLYRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTV
QDEVDRCVECGYCEPVCPSRDLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQTCAVDGMCQTNCPVHINTG
DLVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKPVPAAATNVLTGAARAVLGADRIPQVSDELPGGGKRRSS
GHRSAPHGRPEVVYLPACVNTMFGGVMPGEKTTEFAIISLLTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRRRVV
DIMRQSTRDGELTVISDAVSCSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGLPKVASAALHPTCSSTRMDWNDSL
QRCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSATRREATELAEREFDLYLSANRTCELGMERATGKPWRHALSVLA
ERMVEYAPA
>Mature_808_residues
SVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTVIDTADPQCEDKLAHDEPELVETLMALRDQCREQARADEI
TFQFSRKNTMGYGLNAFLDYDTPAQILSHLMIGSEGTLGFISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSGV
TVTELMDSSSLQLCRDDPVNGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSELDLVNKPTFTDDPAVRGPIW
TLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQLFSEHNYPESIIFGHAKDGNIHFLVIEDFRNKAGLDRYE
KFTEDMVTLVLNTHGTLKAEHGTGRIMAPFVARQYGPDLYRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTVQ
DEVDRCVECGYCEPVCPSRDLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQTCAVDGMCQTNCPVHINTGD
LVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKPVPAAATNVLTGAARAVLGADRIPQVSDELPGGGKRRSSG
HRSAPHGRPEVVYLPACVNTMFGGVMPGEKTTEFAIISLLTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRRRVVD
IMRQSTRDGELTVISDAVSCSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGLPKVASAALHPTCSSTRMDWNDSLQ
RCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSATRREATELAEREFDLYLSANRTCELGMERATGKPWRHALSVLAE
RMVEYAPA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To mammalian alkyldihydroxyacetonephosphate synthases, to yeast AIP2 and DLD1 and to E.coli ygcU [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=284, Percent_Identity=24.6478873239437, Blast_Score=90, Evalue=8e-18,
Organism=Homo sapiens, GI37595754, Length=284, Percent_Identity=24.6478873239437, Blast_Score=90, Evalue=8e-18,
Organism=Escherichia coli, GI1787977, Length=475, Percent_Identity=24, Blast_Score=96, Evalue=1e-20,
Organism=Escherichia coli, GI1789351, Length=299, Percent_Identity=27.0903010033445, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71992392, Length=281, Percent_Identity=25.2669039145907, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71992373, Length=282, Percent_Identity=25.531914893617, Blast_Score=101, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71992381, Length=282, Percent_Identity=25.531914893617, Blast_Score=101, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17534361, Length=274, Percent_Identity=24.8175182481752, Blast_Score=70, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320027, Length=395, Percent_Identity=23.7974683544304, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR006094 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 87432; Mature: 87301

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTVIDTADPQCEDKLAHDEPE
CCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCHH
LVETLMALRDQCREQARADEITFQFSRKNTMGYGLNAFLDYDTPAQILSHLMIGSEGTLG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHH
FISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSGVTVTELMDSSSLQLCRDDPV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC
NGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSELDLVNKPTFTDDPAVRGPI
CCEEECCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCH
WTLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQLFSEHNYPESIIFGHAKD
HHHHCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
GNIHFLVIEDFRNKAGLDRYEKFTEDMVTLVLNTHGTLKAEHGTGRIMAPFVARQYGPDL
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCEEECCCCCCCHHHHHHHHCCCHH
YRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTVQDEVDRCVECGYCEPVCPSR
HHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCC
DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQTCAVDGMCQTNCPVHINTG
CCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEECHH
DLVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKPVPAAATNVLTGAARAVLG
HHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHC
ADRIPQVSDELPGGGKRRSSGHRSAPHGRPEVVYLPACVNTMFGGVMPGEKTTEFAIISL
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHH
LTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRRRVVDIMRQSTRDGELTVISDAVS
HHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHH
CSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGLPKVASAALHPTCSSTRMDWNDSL
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHH
QRCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSATRREATELAEREFDLYLSANRTC
HHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCC
ELGMERATGKPWRHALSVLAERMVEYAPA
CCCCHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVACTLGGVLADNSSGMSCGTVANSYRTLDSMIFVLASGTVIDTADPQCEDKLAHDEPE
CEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCHH
LVETLMALRDQCREQARADEITFQFSRKNTMGYGLNAFLDYDTPAQILSHLMIGSEGTLG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHH
FISSAVMNTVKIMPNLATALLHFPTLDAATKALPALVKSGVTVTELMDSSSLQLCRDDPV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC
NGHIIPPAPGSGDAALLVEYHCPDRKSRNEAVAAGNSVTSELDLVNKPTFTDDPAVRGPI
CCEEECCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCH
WTLRSGLYAKVAGTRQSGQTALLEDIAVPVENLAAVCEDLQQLFSEHNYPESIIFGHAKD
HHHHCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
GNIHFLVIEDFRNKAGLDRYEKFTEDMVTLVLNTHGTLKAEHGTGRIMAPFVARQYGPDL
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCEEECCCCCCCHHHHHHHHCCCHH
YRIMRQVKKSVDPAGVLNRGTIITDDPKLHLKEVKLTPTVQDEVDRCVECGYCEPVCPSR
HHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCC
DLTLTPRQRIVMQRAIAQARADGDEVLATDLEERATYPVVQTCAVDGMCQTNCPVHINTG
CCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEECHH
DLVRRLRAEHNPAAWQATWDLAAKGWGPFVTAASAGMSAIKPVPAAATNVLTGAARAVLG
HHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHC
ADRIPQVSDELPGGGKRRSSGHRSAPHGRPEVVYLPACVNTMFGGVMPGEKTTEFAIISL
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHH
LTAAGIGVTVPEGINSLCCGTPWKSKGMTQGYATMRRRVVDIMRQSTRDGELTVISDAVS
HHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHH
CSEGFVHELEYEGVKDIRVVDAVQYVADEVLPIMPGLPKVASAALHPTCSSTRMDWNDSL
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHH
QRCAEAVADEVVVADAWGCCGFAGDRGMLHPELTKSATRREATELAEREFDLYLSANRTC
HHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCC
ELGMERATGKPWRHALSVLAERMVEYAPA
CCCCHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]