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The map label for this gene is rnaSA3 [H]

Identifier: 50842218

GI number: 50842218

Start: 802024

End: 802467

Strand: Direct

Name: rnaSA3 [H]

Synonym: PPA0730

Alternate gene names: 50842218

Gene position: 802024-802467 (Clockwise)

Preceding gene: 50842215

Following gene: 50842219

Centisome position: 31.33

GC content: 58.33

Gene sequence:

>444_bases
ATGACTGTTGCAACCTGGTTCCGGTCTCACCGGTGGTCCGTCTGGATTGTGACCTTGCTAGCAGCTGTCGTCGTAGGCTG
TTCAACGCCCGGTAATGTAGCTGCGGCAGGCTCGAACGCTACCACGGCCCCCATGACCGTCATGGCCACCACACAGTCGT
CTGTTGGGTTGGCCACCATCCAGGAAAACGAGCTGCCTACCCAGGCTCGGCAGACTCTCAAGCTCATTGACTCCGGTGGG
CCCTTCCCATTCAGTCGGGACGGAATTGTCTACCACAACAACAGTGGCGCACTACCTCATCACAAGGACGGCTGGTACCA
CGAGTACACCGCCGCCACTCCTGGAGCGCAGGGTCGAGGACCGCGTCGCATCGTGTGCGGTTCAGACTCTACCTGTTTTT
GGACGTTGGACCATTACTCAACGTTTAAGAGGATCGTCCGATGA

Upstream 100 bases:

>100_bases
CACGGTCGGGGAAGAAGGGGTGTGCGGCCCACTCCAAAGTGTATGCGTAGTCTTTCGGAGGGCATCGGAAGATGAACCGG
CGAGTCCATAGGCTGGTCCC

Downstream 100 bases:

>100_bases
CAGCCGACGTTCAGTCAGGTTCGGGTCCTGAAGCTGGTGGCCCCATTGGTTCAGGGATCCTTCTTGTTGATCCGGCGCAT
AGTTGTGACCCCATCAAGGT

Product: guanyl-specific ribonuclease Sa3 precursor

Products: NA

Alternate protein names: RNase Sa3 [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTVATWFRSHRWSVWIVTLLAAVVVGCSTPGNVAAAGSNATTAPMTVMATTQSSVGLATIQENELPTQARQTLKLIDSGG
PFPFSRDGIVYHNNSGALPHHKDGWYHEYTAATPGAQGRGPRRIVCGSDSTCFWTLDHYSTFKRIVR

Sequences:

>Translated_147_residues
MTVATWFRSHRWSVWIVTLLAAVVVGCSTPGNVAAAGSNATTAPMTVMATTQSSVGLATIQENELPTQARQTLKLIDSGG
PFPFSRDGIVYHNNSGALPHHKDGWYHEYTAATPGAQGRGPRRIVCGSDSTCFWTLDHYSTFKRIVR
>Mature_146_residues
TVATWFRSHRWSVWIVTLLAAVVVGCSTPGNVAAAGSNATTAPMTVMATTQSSVGLATIQENELPTQARQTLKLIDSGGP
FPFSRDGIVYHNNSGALPHHKDGWYHEYTAATPGAQGRGPRRIVCGSDSTCFWTLDHYSTFKRIVR

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 15950; Mature: 15819

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVATWFRSHRWSVWIVTLLAAVVVGCSTPGNVAAAGSNATTAPMTVMATTQSSVGLATI
CCEEEEHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEE
QENELPTQARQTLKLIDSGGPFPFSRDGIVYHNNSGALPHHKDGWYHEYTAATPGAQGRG
ECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC
PRRIVCGSDSTCFWTLDHYSTFKRIVR
CEEEEECCCCEEEEEEHHHHHHHHHHC
>Mature Secondary Structure 
TVATWFRSHRWSVWIVTLLAAVVVGCSTPGNVAAAGSNATTAPMTVMATTQSSVGLATI
CEEEEHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEE
QENELPTQARQTLKLIDSGGPFPFSRDGIVYHNNSGALPHHKDGWYHEYTAATPGAQGRG
ECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC
PRRIVCGSDSTCFWTLDHYSTFKRIVR
CEEEEECCCCEEEEEEHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1398084 [H]