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The map label for this gene is 50842216

Identifier: 50842216

GI number: 50842216

Start: 799479

End: 800435

Strand: Reverse

Name: 50842216

Synonym: PPA0728

Alternate gene names: NA

Gene position: 800435-799479 (Counterclockwise)

Preceding gene: 50842217

Following gene: 50842211

Centisome position: 31.26

GC content: 62.38

Gene sequence:

>957_bases
GTGGTTGGTTTTCGTTCTTCGCGCCTTGCTGTGCCCGCCCTCCTTCTCATGGCTGCTCTGTGGGGTTCGACCCTCGTCGT
CATGAAGGGTGTCTATGCCCACATGAGCCCCGAGAACCTGCTGGCGTGTCGTTTCGCCATGGCAGCCGCCGCATTCGGAA
TCCTCTTCCCGAAGGCCTGGCGCGCCAATATGCGCACCATAGCCAAGGGGGTTATCCTCGGCGTGCTCTTTGCTGCCGGC
CAGCTACTTCAGGCCATTGGACTCGGGACCACTCAGGCTGCCATGAACGGGTTCATCACCAGTCTCTATGTGGTCTTCAC
ACCGCTATTGGCCGCTGTGATCTTTCGCAAGAAGGTCTCCACCGCCATCTGGGGAGCTGTGGCACTGGCGACTGTCGGCA
TGGGAGTGCTGGCTCTTGATCCCTCTACCCTCGGTAGCGGATTCGGTATCGGTCAGCTACTGACTCTGGCTTCCGCCGTG
GCCTACGCCGGCCACATCGTGGCAACTGGACGTTTCGCCAACCCGTCCAACGTCACATCCCTCGGGTTGTATCAAACGAT
CACCGTCGCCATCGTCTGCACCATTGCAGCCCTGCCTGGAGGTCTGAGCGCCCCCACCCACATGGAGGATTGGTTTGCCC
TGGCCTACTTGGCCATCATCTGCGGCACTTTGACAACTTTCATGCAGAGCTGGGGTCAGGCCCGGGTGGAATCGACCCGT
GCCGCCGTCATCATGTGCACTGAGCCGCTGTGGGGCGCCGTCTTCGCTATTGGTCTCGGCGGCGAGCCACTCACCGGGCG
CATTACGATCGGCGGTATCGCCATCCTAGCCGCCATGGCCTTAGTCGTCCGTCCACCTCGTCGTCGCCGCGGCGCACCGC
AGCATCACGCCGAGCCCCCGGTAGTCCAGGTCGATCCGGCCTGGGCTCCGAGGTTCGGCATGGACCGCATGCTTTGA

Upstream 100 bases:

>100_bases
TGCGTTCACGGGGAATCATCCTGCATGCACACCGTCTCACAAAATATTTGATGCCAATCCGGGTTGCGGGGCGAAGATTC
TCGGGCGTATCATGTGATTC

Downstream 100 bases:

>100_bases
TCCCCGGCCCCGAGGTCAGTCTTGCGGCACCTCCCACGGCTGGCCGTTGCGTAGATCGTGGAAGGTGGTCGGCACCATCT
CCTGATGCCGATCAAAGGAC

Product: membrane spanning protein DUF6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MVGFRSSRLAVPALLLMAALWGSTLVVMKGVYAHMSPENLLACRFAMAAAAFGILFPKAWRANMRTIAKGVILGVLFAAG
QLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVSTAIWGAVALATVGMGVLALDPSTLGSGFGIGQLLTLASAV
AYAGHIVATGRFANPSNVTSLGLYQTITVAIVCTIAALPGGLSAPTHMEDWFALAYLAIICGTLTTFMQSWGQARVESTR
AAVIMCTEPLWGAVFAIGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHAEPPVVQVDPAWAPRFGMDRML

Sequences:

>Translated_318_residues
MVGFRSSRLAVPALLLMAALWGSTLVVMKGVYAHMSPENLLACRFAMAAAAFGILFPKAWRANMRTIAKGVILGVLFAAG
QLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVSTAIWGAVALATVGMGVLALDPSTLGSGFGIGQLLTLASAV
AYAGHIVATGRFANPSNVTSLGLYQTITVAIVCTIAALPGGLSAPTHMEDWFALAYLAIICGTLTTFMQSWGQARVESTR
AAVIMCTEPLWGAVFAIGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHAEPPVVQVDPAWAPRFGMDRML
>Mature_318_residues
MVGFRSSRLAVPALLLMAALWGSTLVVMKGVYAHMSPENLLACRFAMAAAAFGILFPKAWRANMRTIAKGVILGVLFAAG
QLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVSTAIWGAVALATVGMGVLALDPSTLGSGFGIGQLLTLASAV
AYAGHIVATGRFANPSNVTSLGLYQTITVAIVCTIAALPGGLSAPTHMEDWFALAYLAIICGTLTTFMQSWGQARVESTR
AAVIMCTEPLWGAVFAIGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHAEPPVVQVDPAWAPRFGMDRML

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33289; Mature: 33289

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGFRSSRLAVPALLLMAALWGSTLVVMKGVYAHMSPENLLACRFAMAAAAFGILFPKAW
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
RANMRTIAKGVILGVLFAAGQLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIWGAVALATVGMGVLALDPSTLGSGFGIGQLLTLASAVAYAGHIVATGRFANPSNVTS
HHHHHHHHHHHHCCCCEEECCHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHH
LGLYQTITVAIVCTIAALPGGLSAPTHMEDWFALAYLAIICGTLTTFMQSWGQARVESTR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAVIMCTEPLWGAVFAIGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHAEPP
EEEEEECCCHHHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
VVQVDPAWAPRFGMDRML
EEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MVGFRSSRLAVPALLLMAALWGSTLVVMKGVYAHMSPENLLACRFAMAAAAFGILFPKAW
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
RANMRTIAKGVILGVLFAAGQLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIFRKKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIWGAVALATVGMGVLALDPSTLGSGFGIGQLLTLASAVAYAGHIVATGRFANPSNVTS
HHHHHHHHHHHHCCCCEEECCHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHH
LGLYQTITVAIVCTIAALPGGLSAPTHMEDWFALAYLAIICGTLTTFMQSWGQARVESTR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAVIMCTEPLWGAVFAIGLGGEPLTGRITIGGIAILAAMALVVRPPRRRRGAPQHHAEPP
EEEEEECCCHHHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
VVQVDPAWAPRFGMDRML
EEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]