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The map label for this gene is yagU [H]

Identifier: 50842167

GI number: 50842167

Start: 745628

End: 746395

Strand: Direct

Name: yagU [H]

Synonym: PPA0680

Alternate gene names: 50842167

Gene position: 745628-746395 (Clockwise)

Preceding gene: 50842166

Following gene: 50842174

Centisome position: 29.12

GC content: 59.9

Gene sequence:

>768_bases
ATGCTGAGGAGGGTCACGAGGTCGTCGTGGGAGACCCACTCATCACCTGGAATCCGGCCGGGGTCGTTGCGGGTGGCCGC
AGTGCGGTCTGCCCGATCGTCGTCCTCGACGCTTCCAGCGGAAGGATCGGTGACGCCGCTGTTACCGGGGAGCGGATTGC
CTGCGGCGATCAATTGTTCCAGTGGTTGGACGTTCCTGAGCAGGATGCCAATGTCTGTGCCCAGCACGACTGATCGGGCC
CGTCGTCACCCTGAGGTAGCGGCTCTGGTAGGGGTTGTCGCCGGAATTTTCTCGGCGATCGTCAAGTTTGGGTGGGAAGT
GCCTTTCCCACCGCGCACCCCTGAGCGAAACGCAACGAATCCGCCCCAGCAATTGTTGGAGCAGCTGGGATTCAGCGATC
ACTTTGCCCACACGCTGGTGTATTTCAACGGCAATGGCTTGCCGGTTATGAGCTTCATCATTCACTTCGGATTTGCCATC
TTCTTCGGCGTCGCGTATTGCGTTGGCGCTGAACGGTTCCCGAAAATCACACTATGGCAGGGCGTTGCGTTTGGTGTCGT
CGTCTACGTCGTCTTTCACGTCATCGTGATGCCGGGATTGGGTACCGTTCCGGCGCCGTGGCACCAGCCGTGGCAGGAAC
ATCTCAGTGAGTTGTTGGGTCACATCGTCTGGATGTGGAGCATCGAGGTCGTGCGCCGTGACCTGCGTAGCCGCATCACT
GGCGAGCCCGATCCGTGGGTTGAGCCATCGATGACAGCAGGACGATAA

Upstream 100 bases:

>100_bases
CTGCACCCGCACGCTTTCGTCATCCAGGCAGAGGGGTTCGGGGTACTCGTACACCTTGGCATTGACACCGTCCAGCTCGA
TGGGGAGGGGTTCACCCTTC

Downstream 100 bases:

>100_bases
GGGTAGCGACGCCGACGAATTCGTAGGCGTCGGTCAGGATCTTCTGCCACCATGCTGCGGTGAGTTCTCGGTTACGACCG
GCAGGAAACCACCAGACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLRRVTRSSWETHSSPGIRPGSLRVAAVRSARSSSSTLPAEGSVTPLLPGSGLPAAINCSSGWTFLSRMPMSVPSTTDRA
RRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATNPPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAI
FFGVAYCVGAERFPKITLWQGVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRIT
GEPDPWVEPSMTAGR

Sequences:

>Translated_255_residues
MLRRVTRSSWETHSSPGIRPGSLRVAAVRSARSSSSTLPAEGSVTPLLPGSGLPAAINCSSGWTFLSRMPMSVPSTTDRA
RRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATNPPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAI
FFGVAYCVGAERFPKITLWQGVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRIT
GEPDPWVEPSMTAGR
>Mature_255_residues
MLRRVTRSSWETHSSPGIRPGSLRVAAVRSARSSSSTLPAEGSVTPLLPGSGLPAAINCSSGWTFLSRMPMSVPSTTDRA
RRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATNPPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAI
FFGVAYCVGAERFPKITLWQGVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRIT
GEPDPWVEPSMTAGR

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=202, Percent_Identity=41.0891089108911, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009898 [H]

Pfam domain/function: PF07274 DUF1440 [H]

EC number: NA

Molecular weight: Translated: 28049; Mature: 28049

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRVTRSSWETHSSPGIRPGSLRVAAVRSARSSSSTLPAEGSVTPLLPGSGLPAAINCS
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECC
SGWTFLSRMPMSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATN
CCCHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAIFFGVAYCVGAERFPKITLWQ
CHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRIT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEPDPWVEPSMTAGR
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRRVTRSSWETHSSPGIRPGSLRVAAVRSARSSSSTLPAEGSVTPLLPGSGLPAAINCS
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECC
SGWTFLSRMPMSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTPERNATN
CCCHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAIFFGVAYCVGAERFPKITLWQ
CHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSIEVVRRDLRSRIT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEPDPWVEPSMTAGR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]