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The map label for this gene is yohD [C]

Identifier: 50842161

GI number: 50842161

Start: 741789

End: 742397

Strand: Direct

Name: yohD [C]

Synonym: PPA0674

Alternate gene names: 50842161

Gene position: 741789-742397 (Clockwise)

Preceding gene: 50842160

Following gene: 50842163

Centisome position: 28.97

GC content: 57.14

Gene sequence:

>609_bases
ATGAATCTGACCGCATGGATGGCGAGTATCAACGGCGTCATTGCGGCCAATGCCCCACATCCTTGGGTTATTGGGGCGTT
GTGGGGGCTATGCGTCATCGATGGGTTTTTCCCGCCGGTTCCTAGCGAATCTCTCGTCGTCGCCTTGGCAGCAATTGGAC
ATCCTTCGCGGTGGCTCATCATCCCGGTAGCTGCTGCGGGCGCGATCTGCGGAGACAATATTGCATATTGGGTGGGACGC
CAGATTGGCCATACTAAGCTCTTTACCGGTGGGCCGAAGCGGCAGAAGACGGTTGCATGGGCGACCCATCAATTGAGGGT
CCGAGGCCCGCTGTGCATCTTGGTAGCCCGATACATCCCTGGGGGCCGCGTCGTCGTCAATGCGATGGCTGGGGCCACTC
GTTTTTCATATCGGGTTTTCCTACCTATCGACGCCCTAGCCGGAGTATTGTGGGCCTGCTATGCCACCGCTATTGGTGCT
GGGGCAGCCAGTTTCTTGGGCAACAATCACATTCTTGCTGCCACCGTGGGGATTATTGGAGCGATTATCATCGGCGTCAT
CCTCGATCAAATATTGCGGCGATTAATGCCAGCGCCGCAGAGTGACTGA

Upstream 100 bases:

>100_bases
TCGCGGCCGCTCCGGTCGTTGATCAGTTGGAGACGGTCTACCGAAAGGCGGTTGCCGACCACGGTATGGCTGGTTGAGTC
CGGATGGAAGACTGGCAGAC

Downstream 100 bases:

>100_bases
GTTGTTTGTGACGCATTATGATGATGCCCTCAGTATTCAAAGGGGCGCCATCATGAGAGTAGGAGACTCGAAGATCAGAT
TCGTCCCTCTTTTTGGGCGT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLIIPVAAAGAICGDNIAYWVGR
QIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIPGGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGA
GAASFLGNNHILAATVGIIGAIIIGVILDQILRRLMPAPQSD

Sequences:

>Translated_202_residues
MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLIIPVAAAGAICGDNIAYWVGR
QIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIPGGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGA
GAASFLGNNHILAATVGIIGAIIIGVILDQILRRLMPAPQSD
>Mature_202_residues
MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLIIPVAAAGAICGDNIAYWVGR
QIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIPGGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGA
GAASFLGNNHILAATVGIIGAIIIGVILDQILRRLMPAPQSD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21248; Mature: 21248

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLI
CCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEE
IPVAAAGAICGDNIAYWVGRQIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIP
EEECCCCCHHCCCHHHHHHCCCCCEEEECCCCCCCCEEEEHEEEEEECCCCEEEHHHHCC
GGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGAGAASFLGNNHILAATVGIIG
CCCEEEEEHHCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
AIIIGVILDQILRRLMPAPQSD
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLTAWMASINGVIAANAPHPWVIGALWGLCVIDGFFPPVPSESLVVALAAIGHPSRWLI
CCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEE
IPVAAAGAICGDNIAYWVGRQIGHTKLFTGGPKRQKTVAWATHQLRVRGPLCILVARYIP
EEECCCCCHHCCCHHHHHHCCCCCEEEECCCCCCCCEEEEHEEEEEECCCCEEEHHHHCC
GGRVVVNAMAGATRFSYRVFLPIDALAGVLWACYATAIGAGAASFLGNNHILAATVGIIG
CCCEEEEEHHCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
AIIIGVILDQILRRLMPAPQSD
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]