| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842046
Identifier: 50842046
GI number: 50842046
Start: 620292
End: 621275
Strand: Direct
Name: 50842046
Synonym: PPA0560
Alternate gene names: NA
Gene position: 620292-621275 (Clockwise)
Preceding gene: 50842045
Following gene: 50842049
Centisome position: 24.23
GC content: 62.6
Gene sequence:
>984_bases ATGAGCGCTGACATCACCGCTATCCTCGAAGACCTTGCTGCCGGGAGGATAGACACCGCCGAGGCGAGCCGCCGTATCGC TGCCGCTGGACAAGACCAGCCCACGTCTGGGGTCACGAGTGGCCCCGATTGCGGCCCGGGCCCCCGGCACGGGGCTTCTG AGGATGACGCTCCGGGGGCTGATAGCAGTTCGCTAGGTGGGTTTACCATTCCCTCCGAGGCGAAGGAAGGACTTCGGTCT GCATGGCGAATCGTGTCCGGAATGGCTGAGAGCGTCGGAGAAACCGTCGCCTCAACGGTGTCGTCCGGGTCGCGCCGAGC CAGCGGAGGCAACGATTCGGAGAGAAGTGTCGACATGACGACGGATCTGGACCGGGTACGCATCAACTGCAGCGGACGTC GAATTCGGCTTATCGGGGACCGATCGATTCCAGGTGTGCAGATTGGGGGCAAACACACCCGGCGACGCATTGGACGGGTT GTTGAAATCGGGATCGATGGACATCTGGCTCCGGACCTCGGCGTCCTCAAGAGATTCCGCTTCCCGACCGGTATGGACGG GGTCAAGGACTTGAGCTTCGGCCGTGAGGTGACGGTTCGGGTGCATCCTGATCTTCCTGTTGACATCGAGCTGTCCGGTG GCTCGCTGCGGGCCAGCGGAGTCGAGAGGTTCGGGCGTGTGCGTGTTACTGCTGGTGTTACCGAGATCGACGGAGTGCAC CAGATTGAGGATGGGCTCTTCCAAGCGGGAAGTGGCAGCATCACCGGGCGCATCGATACTGGTCGCTCCCAGATTCGCGT CGAGTCGGGCAATCTCAACATCAAGCTGGCGGGCGGTTCCAACGTGTCAGTGCGGGGCAAGGCGCAGACCGGCATGATCT CCTGGCCCGAAGGTGGAGAGGTTGACGAATACGTCATGGGCAACGGATCTGCCCGTCTCGACCTTACGTGCCTGGTCGGG CGGATTGCCGTTCGCGCGCTGTGA
Upstream 100 bases:
>100_bases CCCGAGACCCCGGCGAACGAAGTCCCGCCAAACCACGATGACCTGGCTGCTGAGCACACGTGAACATTAACCTGTTGGGC TCCCCCGTAAAGTTGATGTC
Downstream 100 bases:
>100_bases GGTAGCGATATCAGGCAGAACACGATGAGGGCAGGGTGCATGGCGCCCTGCCCTCATAGCGATTAGCGATGTTGTACGAC AATGCGTGTGACGATTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGADSSSLGGFTIPSEAKEGLRS AWRIVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMTTDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRV VEIGIDGHLAPDLGVLKRFRFPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVH QIEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGEVDEYVMGNGSARLDLTCLVG RIAVRAL
Sequences:
>Translated_327_residues MSADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGADSSSLGGFTIPSEAKEGLRS AWRIVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMTTDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRV VEIGIDGHLAPDLGVLKRFRFPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVH QIEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGEVDEYVMGNGSARLDLTCLVG RIAVRAL >Mature_326_residues SADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGADSSSLGGFTIPSEAKEGLRSA WRIVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMTTDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRVV EIGIDGHLAPDLGVLKRFRFPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVHQ IEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGEVDEYVMGNGSARLDLTCLVGR IAVRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34111; Mature: 33979
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGA CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSSSLGGFTIPSEAKEGLRSAWRIVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMT CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE TDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRVVEIGIDGHLAPDLGVLKRFR CCCEEEEEEECCCEEEEEECCCCCCEEECCHHHHHHHCEEEEECCCCCCCCCHHHHHHHC FPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVH CCCCCCCHHHHCCCCEEEEEECCCCCEEEEECCCCEEHHHHHHHCEEEEEECCHHHCCHH QIEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGE HHHHHHEECCCCCEEEEEECCCEEEEEECCCEEEEEECCCCEEEEECCCCCEEECCCCCC VDEYVMGNGSARLDLTCLVGRIAVRAL CCCEEECCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure SADITAILEDLAAGRIDTAEASRRIAAAGQDQPTSGVTSGPDCGPGPRHGASEDDAPGA CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSSSLGGFTIPSEAKEGLRSAWRIVSGMAESVGETVASTVSSGSRRASGGNDSERSVDMT CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE TDLDRVRINCSGRRIRLIGDRSIPGVQIGGKHTRRRIGRVVEIGIDGHLAPDLGVLKRFR CCCEEEEEEECCCEEEEEECCCCCCEEECCHHHHHHHCEEEEECCCCCCCCCHHHHHHHC FPTGMDGVKDLSFGREVTVRVHPDLPVDIELSGGSLRASGVERFGRVRVTAGVTEIDGVH CCCCCCCHHHHCCCCEEEEEECCCCCEEEEECCCCEEHHHHHHHCEEEEEECCHHHCCHH QIEDGLFQAGSGSITGRIDTGRSQIRVESGNLNIKLAGGSNVSVRGKAQTGMISWPEGGE HHHHHHEECCCCCEEEEEECCCEEEEEECCCEEEEEECCCCEEEEECCCCCEEECCCCCC VDEYVMGNGSARLDLTCLVGRIAVRAL CCCEEECCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA