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The map label for this gene is 50842040

Identifier: 50842040

GI number: 50842040

Start: 612696

End: 614684

Strand: Direct

Name: 50842040

Synonym: PPA0554

Alternate gene names: NA

Gene position: 612696-614684 (Clockwise)

Preceding gene: 50842039

Following gene: 50842043

Centisome position: 23.93

GC content: 58.92

Gene sequence:

>1989_bases
ATGTCTGACCTATCGAGCTCGTCAGCGCCGGCCCGACGGCCGGGAACCTCAGTACGTGAATTGACCTTCCGAGGCATCGT
CCTCGGTGGCCTCATGACGTTGATTTTCACCGCGGCGAATGTTTACCTCGGGCTCAAGGTCGGTTTGACCTTCGCCACGT
CTATTCCTGCTGCCGTCATCTCGATGGCCGTGCTGCGTCACTTCAAGGGACACTCGGTCGAAGAGAACAACATTGTCCAG
ACGATCGCGTCGGCGGCCGGCACCCTCTCCGCGATTATTTTCGTGCTGCCCGGACTTATCATGGTCGGCTGGTGGTCAGG
TTTCCCGTACTGGACCACCCTAGCTATCTGTCTAGTTGGCGGCATCCTCGGCGTTATGTATTCGATTCCGCTGCGTCGGG
CCCTCGTGACAGGCTCGGATCTTCCCTACCCGGAGGGCGTCGCAGGAGCTGAGGTGCTCAAAGTAGGCGATTCCGCTGGT
GCCGCCGAGGCTAACAAGGTGGGTCTGCGAGTCATCATCGTCGGTTCTGTGGTCTCTGCAGCGTACGCCCTGTTGTCGGA
TCTTAAGCTTGTGAAGTCGGCGCTGACCAAGCCTTTCAAGACGGGCGACAGTAGCGGCTCGATGGTTGGCGTGAGCATGT
CGATGGCGCTCATTGGCGTCGGTCACTTGGTTGGTATTGCCGTGGCCGCGGCCATCCTCGTCGGTCTCTTTATTTCGTAC
GGTGCGATCCTGCCGTGGCGGGTATCCGGCAAAGTTGGTAGCGACCTTACGGTGATTCAGGACGTCTTCACTAGCGATGT
CCGCTTCGTCGGTGCTGGCACCATCGGTGTTGCGGCTATCTGGACTCTTGTCAAGGTCATTGGCCCCATCGTCAAGGGCA
TCAGCGATTCCATAAGTTCCTCCAAGACACGTCACGAGGGCGGCGAAGTCCCACTGACCGAGCGTGACCTACCGGTTTCT
GTTGTCCTCACCGTGGTGTTGATCTCGATGATCCCGATCGGTTTCATGCTGTGGGGATTTGCTCGCGACATGGTTGTATC
GCGGTCCATGACCGGCGTCATCATCGTCAGCTTGGCGTTCATCCTGCTCGTCGGTCTGGCTGTTGCTTCTGTGTGCGGTT
ACATGGCTGGTCTCATCGGTGCATCCAATAGCCCGATTTCCGGCGTTGGCATCCTGGTCGTCCTGGTGGCTGCTCTCCTC
ATCAAACTCACCTATGGTGCTGTTGGTGGTGGTGAGACGGTTAAGCTGGTGGCCTATACCCTGTTTACCGCATCCATCGT
CTTTGGTATCGCGACGATCTCGAATGACAACCTGCAGGACCTCAAGACTGGTCAGTTGGTTGGTTCGACGCCGTGGAAAC
AGCAGATTGCGCTGATCATCGGAGTTATTTTTGGTTCGGCGATCATCCCGCCCGTCATGCAGCTCATGCAGAGCGCCTTT
GGTTTCCAGGGTGCCCCCGGTGCTGGTCCGAACGCTTTGCAAGCCCCACAAGCTACCCTTATTTCCTCGCTGGCGACTGG
CGTCTTCGGCGGGTCTCTTGACTGGGGACTCATGGGGATTGGTGCCCTGGTGGGTATCGGCGTTATCGTCGTCGACGAGA
TCCTCACTCACACCACCAAGAAGTTCTCCCTTCCGCCGCTAGCCGTCGGGATGGGCATGTACTTGCCGATGACCCTGTCT
TTGACGATTCCGATTGGCGCCGCGCTTGGCTGGCTGTTCGACAAGTGGGCGGCCCACACCGCCGGTGATGTCGAAGGTAA
AAAGCGGACCGGAATCTTGCTGGCCACGGGCCTCATCGTCGGTGAGTCAATCTTCGGTGTCATCTATGCTGCCATGATCG
CGGCCGCGGGATCCGAGGACGCCATTGCCATCGCGCCTGAGTCATGGGACAGCGGCGCTGGGATCGTTGGCGTGATCACC
TTCGCCGCTGCAATCGCGTTCCTGTACCGGTGGACCAAGCGCCAGGCGAAAGAGCGCGTCGAAGCGTGA

Upstream 100 bases:

>100_bases
AGTCCGGGAGACGACAATTGGCGTGAAGGACGTTGCTTTCCATACCTTGGGGCTCTGATGGTGGCATAGTGGTCAAGCCA
TCTTATGGAAGAAGGGGAAC

Downstream 100 bases:

>100_bases
GAGGAGCGATCACCGAGTGCACTCGGCCACCTCGAGGAGCTATCACGGAAGCTGGGCAAGCTCCTCGTCGTTCAGCGTGA
CGTCGACGGACCTGAGGGAA

Product: OPT family oligopeptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MSDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVISMAVLRHFKGHSVEENNIVQ
TIASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAG
AAEANKVGLRVIIVGSVVSAAYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISY
GAILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISSSKTRHEGGEVPLTERDLPVS
VVLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAFILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALL
IKLTYGAVGGGETVKLVAYTLFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAF
GFQGAPGAGPNALQAPQATLISSLATGVFGGSLDWGLMGIGALVGIGVIVVDEILTHTTKKFSLPPLAVGMGMYLPMTLS
LTIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIVGESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVIT
FAAAIAFLYRWTKRQAKERVEA

Sequences:

>Translated_662_residues
MSDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVISMAVLRHFKGHSVEENNIVQ
TIASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAG
AAEANKVGLRVIIVGSVVSAAYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISY
GAILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISSSKTRHEGGEVPLTERDLPVS
VVLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAFILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALL
IKLTYGAVGGGETVKLVAYTLFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAF
GFQGAPGAGPNALQAPQATLISSLATGVFGGSLDWGLMGIGALVGIGVIVVDEILTHTTKKFSLPPLAVGMGMYLPMTLS
LTIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIVGESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVIT
FAAAIAFLYRWTKRQAKERVEA
>Mature_661_residues
SDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVISMAVLRHFKGHSVEENNIVQT
IASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAGA
AEANKVGLRVIIVGSVVSAAYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISYG
AILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISSSKTRHEGGEVPLTERDLPVSV
VLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAFILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALLI
KLTYGAVGGGETVKLVAYTLFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAFG
FQGAPGAGPNALQAPQATLISSLATGVFGGSLDWGLMGIGALVGIGVIVVDEILTHTTKKFSLPPLAVGMGMYLPMTLSL
TIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIVGESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVITF
AAAIAFLYRWTKRQAKERVEA

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 68084; Mature: 67953

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHH
SMAVLRHFKGHSVEENNIVQTIASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAGAAEANKVGLRVIIVGSVVSA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCEEEEEHHHHHHH
AYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISY
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISS
CCCCCEEECCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SKTRHEGGEVPLTERDLPVSVVLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALLIKLTYGAVGGGETVKLVAYT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAF
HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFQGAPGAGPNALQAPQATLISSLATGVFGGSLDWGLMGIGALVGIGVIVVDEILTHTTK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KFSLPPLAVGMGMYLPMTLSLTIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIV
HCCCCCHHHHCCHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHH
GESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVITFAAAIAFLYRWTKRQAKERV
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
EA
CC
>Mature Secondary Structure 
SDLSSSSAPARRPGTSVRELTFRGIVLGGLMTLIFTAANVYLGLKVGLTFATSIPAAVI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHH
SMAVLRHFKGHSVEENNIVQTIASAAGTLSAIIFVLPGLIMVGWWSGFPYWTTLAICLVG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKVGDSAGAAEANKVGLRVIIVGSVVSA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCEEEEEHHHHHHH
AYALLSDLKLVKSALTKPFKTGDSSGSMVGVSMSMALIGVGHLVGIAVAAAILVGLFISY
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAILPWRVSGKVGSDLTVIQDVFTSDVRFVGAGTIGVAAIWTLVKVIGPIVKGISDSISS
CCCCCEEECCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SKTRHEGGEVPLTERDLPVSVVLTVVLISMIPIGFMLWGFARDMVVSRSMTGVIIVSLAF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ILLVGLAVASVCGYMAGLIGASNSPISGVGILVVLVAALLIKLTYGAVGGGETVKLVAYT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LFTASIVFGIATISNDNLQDLKTGQLVGSTPWKQQIALIIGVIFGSAIIPPVMQLMQSAF
HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFQGAPGAGPNALQAPQATLISSLATGVFGGSLDWGLMGIGALVGIGVIVVDEILTHTTK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KFSLPPLAVGMGMYLPMTLSLTIPIGAALGWLFDKWAAHTAGDVEGKKRTGILLATGLIV
HCCCCCHHHHCCHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHH
GESIFGVIYAAMIAAAGSEDAIAIAPESWDSGAGIVGVITFAAAIAFLYRWTKRQAKERV
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]