| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842030
Identifier: 50842030
GI number: 50842030
Start: 600428
End: 601081
Strand: Direct
Name: 50842030
Synonym: PPA0546
Alternate gene names: NA
Gene position: 600428-601081 (Clockwise)
Preceding gene: 50842029
Following gene: 50842031
Centisome position: 23.45
GC content: 61.47
Gene sequence:
>654_bases ATGGCCACTACACCAAGCAATCGACACCGTCCGTCCGGAAGGTCCCAGCGACCGGCCGGGGGACGGACACACGCGTCCTC GCCGAACCGCTCAGGTCCGAGGAACCGCGGAAATTACCAGCGCACTACGCGCACAGAGCCTCCTCGTAATCGAGCTACTC AGGAGGAGGGGGGTCAGCCTCGCCGGTTCGGGCTCACCCTCAGAGCAGTCGTTATGGGTGCGGCTGTTCTGCTGGTACTT GTCATGATTACGCCTAGTTTGGGTATCTACTTCTCTCAGCGTTCCCAGATCTCCCGGACCCAAGACGACGAGGCTCGGAC ACGCGCTTCTATCTCGACCCTTCAAGACGAGGTCAAGAGGTGGCACGATCCCGACTACGTCCGTGCTCAGGCGCGCTCCC AGCTCGGCTGGGTGATGCCGGGCGAAACTGGGTATCAGGTCATTGGAGAAAACGGTAAGGTCATTGGATCGACGACTTCT TTGGACGAAAAAGATCCGGCGAATGAAGCCAGCGCTGACGCTCGCTGGTGGCGAAAGGCTGCGGGATCAGTCCAGGACGC TGACCATCCCGCCCCGCCCCACCCCTCCCCGGGGGCGATGATCACGCCTACACCTTCAGCGAAGTTGTCTTCGCCCAGCC CTTCTCGTCGATGA
Upstream 100 bases:
>100_bases GCTTCCAGGCCTGACTGACGCTATGAGGTGCTGACCGCAGCACCTGACATGACACGACCGTCCCGGTACTGCCGGGGCGG TCGTGTCATGATGGACCACG
Downstream 100 bases:
>100_bases GGTGACCATGCTAGAAGAATTTACTGAGAACGACCGTCAGGACGTCCGGGACCAGCTTGGCCGCGAACCACGAGGAGTCG CCGGTGTGGCCTGGCGCTGT
Product: putative septum formation initiator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MATTPSNRHRPSGRSQRPAGGRTHASSPNRSGPRNRGNYQRTTRTEPPRNRATQEEGGQPRRFGLTLRAVVMGAAVLLVL VMITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKRWHDPDYVRAQARSQLGWVMPGETGYQVIGENGKVIGSTTS LDEKDPANEASADARWWRKAAGSVQDADHPAPPHPSPGAMITPTPSAKLSSPSPSRR
Sequences:
>Translated_217_residues MATTPSNRHRPSGRSQRPAGGRTHASSPNRSGPRNRGNYQRTTRTEPPRNRATQEEGGQPRRFGLTLRAVVMGAAVLLVL VMITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKRWHDPDYVRAQARSQLGWVMPGETGYQVIGENGKVIGSTTS LDEKDPANEASADARWWRKAAGSVQDADHPAPPHPSPGAMITPTPSAKLSSPSPSRR >Mature_216_residues ATTPSNRHRPSGRSQRPAGGRTHASSPNRSGPRNRGNYQRTTRTEPPRNRATQEEGGQPRRFGLTLRAVVMGAAVLLVLV MITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKRWHDPDYVRAQARSQLGWVMPGETGYQVIGENGKVIGSTTSL DEKDPANEASADARWWRKAAGSVQDADHPAPPHPSPGAMITPTPSAKLSSPSPSRR
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23698; Mature: 23566
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTPSNRHRPSGRSQRPAGGRTHASSPNRSGPRNRGNYQRTTRTEPPRNRATQEEGGQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC RRFGLTLRAVVMGAAVLLVLVMITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKR HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHH WHDPDYVRAQARSQLGWVMPGETGYQVIGENGKVIGSTTSLDEKDPANEASADARWWRKA CCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH AGSVQDADHPAPPHPSPGAMITPTPSAKLSSPSPSRR CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure ATTPSNRHRPSGRSQRPAGGRTHASSPNRSGPRNRGNYQRTTRTEPPRNRATQEEGGQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC RRFGLTLRAVVMGAAVLLVLVMITPSLGIYFSQRSQISRTQDDEARTRASISTLQDEVKR HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHH WHDPDYVRAQARSQLGWVMPGETGYQVIGENGKVIGSTTSLDEKDPANEASADARWWRKA CCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH AGSVQDADHPAPPHPSPGAMITPTPSAKLSSPSPSRR CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA