| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841756
Identifier: 50841756
GI number: 50841756
Start: 318756
End: 319277
Strand: Direct
Name: 50841756
Synonym: PPA0266
Alternate gene names: NA
Gene position: 318756-319277 (Clockwise)
Preceding gene: 50841754
Following gene: 50841757
Centisome position: 12.45
GC content: 56.13
Gene sequence:
>522_bases ATGGCCAACAACTATGGCGTGTCGCGTAGGACGTTGCTCGGTGTGGGCGGGTTGATGCTTGGCGTTGGGCTGGTGGGTTG CTCTGATTCGGAGGAGGGTTGGGAATCAGTAACCGTTGATCGCATCACGGTGAGCCATCCCACGGAGTGGGTGGAGAAGC CACCGGAGAATGAAAATTTCACCAAGAATTTCACTGACGGCCCCCATGGCATGCAGATTGCGGGTCATTACAGTGACGAC ACCGAACCTACGTTGGCATGGTCCGTGCTTGAATTCATGATCCGCGGGACGTTCCAGGGCTACGACCCCAAGGGGTACCA GGAGATCACCGTCAAGGGCGCTGCCAGGGCGATCAAGTGCCCGTTTGACTTCACTTATAAGGGGAAATCTGCGCGAGGGT ATTGGCTTGTTGCTTCGGGTGTGTTGCCCACAGAGGGTTCCGCGATCGTGCTTCTCCGTCTTCCCCGCGATGACACGAAT CTGGTTGACAAAATTATTGCGTCGATGTCGTTCAAGGCGTGA
Upstream 100 bases:
>100_bases TATCGGGATGAGGCCCATGTTGGCCAAGTATTTCGAGAGCACCAGAACGCACCGCGTTTCGTTGAAGCGGTGGCTTCGGG CTGTAAGTGAGTGAGGGATG
Downstream 100 bases:
>100_bases TCTTGCGCCCTGCTTGAGGTGGTAGAGATATGAGGCAAGATACTCGGTCGGCATGGGCGGACTCTACTTTGACGTCGCCG GCACCGAAGCGACGGTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENENFTKNFTDGPHGMQIAGHYSDD TEPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIKCPFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTN LVDKIIASMSFKA
Sequences:
>Translated_173_residues MANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENENFTKNFTDGPHGMQIAGHYSDD TEPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIKCPFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTN LVDKIIASMSFKA >Mature_172_residues ANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENENFTKNFTDGPHGMQIAGHYSDDT EPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIKCPFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTNL VDKIIASMSFKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18953; Mature: 18821
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENENF CCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCHHHHHCCCCCCCC TKNFTDGPHGMQIAGHYSDDTEPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIKC CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEC PFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTNLVDKIIASMSFKA CCCEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure ANNYGVSRRTLLGVGGLMLGVGLVGCSDSEEGWESVTVDRITVSHPTEWVEKPPENENF CCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCHHHHHCCCCCCCC TKNFTDGPHGMQIAGHYSDDTEPTLAWSVLEFMIRGTFQGYDPKGYQEITVKGAARAIKC CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEC PFDFTYKGKSARGYWLVASGVLPTEGSAIVLLRLPRDDTNLVDKIIASMSFKA CCCEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA