Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50841687

Identifier: 50841687

GI number: 50841687

Start: 241522

End: 242385

Strand: Direct

Name: 50841687

Synonym: PPA0198

Alternate gene names: NA

Gene position: 241522-242385 (Clockwise)

Preceding gene: 50841686

Following gene: 50841695

Centisome position: 9.43

GC content: 53.7

Gene sequence:

>864_bases
GTGGTTCTGCTTGCTCCTGTTGTCATGGGCGCTGCGAAATTCAACTACGGTATGGAGATTAGAGATGAGGATCACGTCCG
CTCCACGTTCGTTTACGGTGTCTCTAGAGCAGATCTAGAGGAGGCAGGGAAGAAACCCTCAGATTTCTCCGATTGCGACA
AGACGTTCGATGTGTCTGCCTCCGAAAAGCAACACGGCGTAAAAGCTGAGTTCGTCGAGGACAAGGAATACGTTGGCTGC
AAATTCACGATGACCACCACTGCAGATGACGCGCGGGGCGCTGGATTGGGATTGACTTTTGATGCGGACAAGGTGTCACT
ATCTATTGGTAGGAAGTTTTTCGAGGATGCTCGGCTTGATAAAATCAAGGTAGGTGCCTTTAAAGTCTCGGTGACGTTCC
CTGGTAAGGTGATCAGCCACTCGGGTTCAAGCAGTGTTGACGGCAATACTGTCACGTGGACCGATATCAAGGACTCTACA
TCAGGATTGAAGGCTGTGGGCGAGCGACCTACCGGTGCTGCGACGGCGGGACCGTCATTCTGGAAGGGCTTCGGGAGACA
TGGCATCAGAGGGGGGATCATTGGCCTCATTGCGGGTATTGCCTCCTACTTTGGTAATAAGCGACGTGCGAAGAAAAAGC
GGGCGAAGTCTGGCGGGGCAACTGCGACCGCGCAGTACCCGGGATACGGGCAGCCGCAGCCCCAAGAATGGCAGGCTCCG
GGTCAGAACGGTCACCAGTATGGGGAATCGATGAATTCCGGGGGCAACCAACCTTATATGCAGGATGGTCGTTACATCGG
GGACCCGTGGAATGCAAATTCGACGAACACTTCAGGGTTTAACGAGAAACCCAATCCAAGATAG

Upstream 100 bases:

>100_bases
GGGCCGTGAGCGCCACGCTCAAACCTGAAGGCACAGGTCTCCCGTTCATGATTTAATATGGGCTATGTTCAATCTGCCGC
GCCCGGTGAGGTGCTGTTTG

Downstream 100 bases:

>100_bases
GTGCGCACCCGGGGCGGTGCTCGCCCCGGTGTGGTCTGTGGTAATTCCCTGTGATGAATCGTTGAGTTGTGTCGGCTTCT
ATGCCGCAGGTGAGTAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MVLLAPVVMGAAKFNYGMEIRDEDHVRSTFVYGVSRADLEEAGKKPSDFSDCDKTFDVSASEKQHGVKAEFVEDKEYVGC
KFTMTTTADDARGAGLGLTFDADKVSLSIGRKFFEDARLDKIKVGAFKVSVTFPGKVISHSGSSSVDGNTVTWTDIKDST
SGLKAVGERPTGAATAGPSFWKGFGRHGIRGGIIGLIAGIASYFGNKRRAKKKRAKSGGATATAQYPGYGQPQPQEWQAP
GQNGHQYGESMNSGGNQPYMQDGRYIGDPWNANSTNTSGFNEKPNPR

Sequences:

>Translated_287_residues
MVLLAPVVMGAAKFNYGMEIRDEDHVRSTFVYGVSRADLEEAGKKPSDFSDCDKTFDVSASEKQHGVKAEFVEDKEYVGC
KFTMTTTADDARGAGLGLTFDADKVSLSIGRKFFEDARLDKIKVGAFKVSVTFPGKVISHSGSSSVDGNTVTWTDIKDST
SGLKAVGERPTGAATAGPSFWKGFGRHGIRGGIIGLIAGIASYFGNKRRAKKKRAKSGGATATAQYPGYGQPQPQEWQAP
GQNGHQYGESMNSGGNQPYMQDGRYIGDPWNANSTNTSGFNEKPNPR
>Mature_287_residues
MVLLAPVVMGAAKFNYGMEIRDEDHVRSTFVYGVSRADLEEAGKKPSDFSDCDKTFDVSASEKQHGVKAEFVEDKEYVGC
KFTMTTTADDARGAGLGLTFDADKVSLSIGRKFFEDARLDKIKVGAFKVSVTFPGKVISHSGSSSVDGNTVTWTDIKDST
SGLKAVGERPTGAATAGPSFWKGFGRHGIRGGIIGLIAGIASYFGNKRRAKKKRAKSGGATATAQYPGYGQPQPQEWQAP
GQNGHQYGESMNSGGNQPYMQDGRYIGDPWNANSTNTSGFNEKPNPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30804; Mature: 30804

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLAPVVMGAAKFNYGMEIRDEDHVRSTFVYGVSRADLEEAGKKPSDFSDCDKTFDVSA
CEEECCHHHHHHHHCCCCEECCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHCCCCCCCC
SEKQHGVKAEFVEDKEYVGCKFTMTTTADDARGAGLGLTFDADKVSLSIGRKFFEDARLD
CHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
KIKVGAFKVSVTFPGKVISHSGSSSVDGNTVTWTDIKDSTSGLKAVGERPTGAATAGPSF
EEEEEEEEEEEECCCHHEECCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCHH
WKGFGRHGIRGGIIGLIAGIASYFGNKRRAKKKRAKSGGATATAQYPGYGQPQPQEWQAP
HHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
GQNGHQYGESMNSGGNQPYMQDGRYIGDPWNANSTNTSGFNEKPNPR
CCCCHHHHHHHCCCCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLLAPVVMGAAKFNYGMEIRDEDHVRSTFVYGVSRADLEEAGKKPSDFSDCDKTFDVSA
CEEECCHHHHHHHHCCCCEECCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHCCCCCCCC
SEKQHGVKAEFVEDKEYVGCKFTMTTTADDARGAGLGLTFDADKVSLSIGRKFFEDARLD
CHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
KIKVGAFKVSVTFPGKVISHSGSSSVDGNTVTWTDIKDSTSGLKAVGERPTGAATAGPSF
EEEEEEEEEEEECCCHHEECCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCHH
WKGFGRHGIRGGIIGLIAGIASYFGNKRRAKKKRAKSGGATATAQYPGYGQPQPQEWQAP
HHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
GQNGHQYGESMNSGGNQPYMQDGRYIGDPWNANSTNTSGFNEKPNPR
CCCCHHHHHHHCCCCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA