| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is kdpB [H]
Identifier: 50841607
GI number: 50841607
Start: 139216
End: 141330
Strand: Direct
Name: kdpB [H]
Synonym: PPA0116
Alternate gene names: 50841607
Gene position: 139216-141330 (Clockwise)
Preceding gene: 50841606
Following gene: 50841608
Centisome position: 5.44
GC content: 62.74
Gene sequence:
>2115_bases ATGACCGTCATCCCTTCGAATTCGCGTTCCCGCGGTCTCACCGGGACTCAGGCGCGTCAGGCCCTGCCCGGAGCCCTTCG TAAGCTTGATCCGCGTTTTCAGTGGCGCAACCCGGTTATGTTTTTGGTGTGGATTGGCGCAGTCCTGACAACCATCATCG CTGGCCTGGAACTGCTCACTGGTGTCACCGACGGCGGTGTTTCCGTCGGTTTTTCCATGGCCATTGCGGTGTGGCTGTGG CTGACCGTCATCTTCGCCAACCTTGCCGAGTCGATCGCTGAGGGTCGCGGCAAGGCCCAGGCCGAGTCATTGCGCAAGAC CCGCACCGCCACCAGCGCGATTCGCGTCGACGGGTGGGACGAGCGGAACGATCCGTCCGCCGAGCACACCACGACAACCG AGGTCGTCTCCTCGGAGCTCAGGTATGGCGACGTCGTCGTCGTGGCGGCGGGCCAGACGATCCCTGGTGACGGCGACATC GTCTGGGGCATCGCTTCGGTCGACGAATCGGCCATCACCGGTGAGTCAGCCCCCGTGGTACGGGAGTCCGGCGGCGACCG TTCTGCCGTCACCGGTGGTACGACAGTGCTTTCGGACCGTATCGTCGTCAAAATCACCTCGAAGCCCGGGCAAAGTTTCG TCGACCGCATGATCGCCCTGGTTGAGGGGTCCGGACGTCAGAAGACCCTCAACGAGATTGCCCTCAATATTTTGCTGGCG AGCCTCTCGATTGTCTTTGTCCTCGTCACCCTGACCCTCAACCCGATTGCGTCCCTGGCCGCCAGGCCGGTGAGCGTCAC GGTATTGGTGGCGCTGCTGGTCTGCCTCGTCCCGACGACGATCGGTGCTCTGCTGTCGGCCATCGGCATCGCGGGTATGG ACCGCCTGGTGCAGCACAACGTGTTGGCAATGTCCGGACGCGCGGTGGAGGCCGCTGGCGACGTTACGACTCTTCTGCTC GACAAGACTGGCACCATCACCTACGGAAACCGTCGTGCCAGCGAATTCATACCGATGCCGGGTGTGAGCGACAAAGAGAT TCGCGACGCGGCCGCCCGGTCTTCGCTGGCCGACCCCACTCCCGAGGGCACCTCCATCGTCGACCTGGCCCGCGAGCAGG GCTTCGTCCCCGATGCCTGCGGCGAACAGGGGAAAGTCGTCCCCTTTACCGCTCAGACCAGAATGTCGGGCATCGACCTT CCCGACGGCACCAAAATCCGTAAGGGTGCCGGATCTGCTGTACGCGCCTGGCTGACGGAGTCCCACATCAATATGGACAT CGACACGCTGGCGCACATGGATCGCCGGGTCGACTCGGTGTCCCAGTCCGGTGGTACTCCGCTCGTCGTGGCGGTACGCA CCCCCGACCACTCGGGCAAGGTGCTCGGCGTCGTTCACCTCAAGGACATCGTCAAGGAGGGTCTAACCGACCGGTTTGCT GAGCTGCGTCGAATGGGCATCCGCACTGTCATGGTGACCGGAGACAACCCGCTGACCGCAGCCGCCATTGCCAAGGAGGC TGGCGTGGACGATTTCCTCGCCGAGGCCACCCCGGAGGACAAGCTCGCCTACATCCGCAAGGAGCAGGAGGGTGGCCGGA TGGTCGCGATGACCGGTGACGGCACCAACGATGCCCCGGCTCTGGCCCAGGCGGACGTCGGCGTCGCGATGAACACCGGC ACCTCGGCTGCTAAGGAGGCCGGCAACATGGTGGACCTTGACTCCGACCCGACGAAGCTCATCAGCATTGTCGGAATCGG CAAGCAACTACTCATCACGCGCGGTGCCCTGACGACCTTCTCGATCGCCAACGATATTGCCAAGTATTTCGCGATCATCC CAGCGATCTTCATGGCGACCTACCCGGGTCTGTCGGCCCTCAATATTATGGGTTTGCATTCCCCAGCGTCGGCGGTGCTC TCGGCGATCATCTTTAACGCCATCATCATCGTTATTTTGGTTCCGCTGGCCCTCAAAGGCGTGGCATACAAGCCCGCCGG GGCGTCGAAAATCCTCGCACGGAACCTGCGCATCTACGGGTTGGGCGGTGTTGTTGCGCCGTTCATCGGCATCTGGCTTA TCGACCTGATTATCCGTCTCATTCCCGGCTTCTGA
Upstream 100 bases:
>100_bases TGTTCACGACCCTGATCGTGTTCACCGCGATCCTCGTCACAGCGCTTGTCTTCTTTCCGGTCCTCACGCTCGGACCGCTG GCCGAAGGACTGATCTGATC
Downstream 100 bases:
>100_bases TCGGAGTTCATCATGATCATCTCCTCTAGGACTCGCACCGTCCTCGTCGGGTTGCGCTCGATGCTGCTGTTTACTGTTAT CGTCGGCGTCGTGTACACCG
Product: potassium-transporting ATPase B chain
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] B chain; Potassium-binding and translocating subunit B; Potassium-translocating ATPase B chain [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MTVIPSNSRSRGLTGTQARQALPGALRKLDPRFQWRNPVMFLVWIGAVLTTIIAGLELLTGVTDGGVSVGFSMAIAVWLW LTVIFANLAESIAEGRGKAQAESLRKTRTATSAIRVDGWDERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDI VWGIASVDESAITGESAPVVRESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMIALVEGSGRQKTLNEIALNILLA SLSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHNVLAMSGRAVEAAGDVTTLLL DKTGTITYGNRRASEFIPMPGVSDKEIRDAAARSSLADPTPEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDL PDGTKIRKGAGSAVRAWLTESHINMDIDTLAHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVHLKDIVKEGLTDRFA ELRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGDGTNDAPALAQADVGVAMNTG TSAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTFSIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVL SAIIFNAIIIVILVPLALKGVAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF
Sequences:
>Translated_704_residues MTVIPSNSRSRGLTGTQARQALPGALRKLDPRFQWRNPVMFLVWIGAVLTTIIAGLELLTGVTDGGVSVGFSMAIAVWLW LTVIFANLAESIAEGRGKAQAESLRKTRTATSAIRVDGWDERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDI VWGIASVDESAITGESAPVVRESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMIALVEGSGRQKTLNEIALNILLA SLSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHNVLAMSGRAVEAAGDVTTLLL DKTGTITYGNRRASEFIPMPGVSDKEIRDAAARSSLADPTPEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDL PDGTKIRKGAGSAVRAWLTESHINMDIDTLAHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVHLKDIVKEGLTDRFA ELRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGDGTNDAPALAQADVGVAMNTG TSAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTFSIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVL SAIIFNAIIIVILVPLALKGVAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF >Mature_703_residues TVIPSNSRSRGLTGTQARQALPGALRKLDPRFQWRNPVMFLVWIGAVLTTIIAGLELLTGVTDGGVSVGFSMAIAVWLWL TVIFANLAESIAEGRGKAQAESLRKTRTATSAIRVDGWDERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDIV WGIASVDESAITGESAPVVRESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMIALVEGSGRQKTLNEIALNILLAS LSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHNVLAMSGRAVEAAGDVTTLLLD KTGTITYGNRRASEFIPMPGVSDKEIRDAAARSSLADPTPEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDLP DGTKIRKGAGSAVRAWLTESHINMDIDTLAHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVHLKDIVKEGLTDRFAE LRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGDGTNDAPALAQADVGVAMNTGT SAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTFSIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVLS AIIFNAIIIVILVPLALKGVAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2216
COG function: function code P; High-affinity K+ transport system, ATPase chain B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily [H]
Homologues:
Organism=Homo sapiens, GI55743073, Length=487, Percent_Identity=28.7474332648871, Blast_Score=150, Evalue=6e-36, Organism=Homo sapiens, GI55743071, Length=515, Percent_Identity=28.1553398058252, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI115529486, Length=589, Percent_Identity=24.6179966044143, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI48762689, Length=694, Percent_Identity=22.478386167147, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI48762687, Length=694, Percent_Identity=22.478386167147, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI48762691, Length=694, Percent_Identity=22.478386167147, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI48762685, Length=694, Percent_Identity=22.478386167147, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI118498343, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786914, Length=683, Percent_Identity=61.493411420205, Blast_Score=753, Evalue=0.0, Organism=Escherichia coli, GI1789879, Length=451, Percent_Identity=31.2638580931264, Blast_Score=146, Evalue=4e-36, Organism=Escherichia coli, GI1786691, Length=467, Percent_Identity=26.7665952890792, Blast_Score=137, Evalue=3e-33, Organism=Escherichia coli, GI2367363, Length=574, Percent_Identity=22.2996515679443, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17556548, Length=482, Percent_Identity=27.5933609958506, Blast_Score=113, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71997262, Length=589, Percent_Identity=24.2784380305603, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193210130, Length=194, Percent_Identity=28.8659793814433, Blast_Score=80, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17554158, Length=194, Percent_Identity=28.8659793814433, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71988506, Length=194, Percent_Identity=28.8659793814433, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17557486, Length=226, Percent_Identity=25.6637168141593, Blast_Score=74, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71997275, Length=198, Percent_Identity=28.7878787878788, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557770, Length=198, Percent_Identity=26.2626262626263, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32566766, Length=198, Percent_Identity=26.2626262626263, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320475, Length=532, Percent_Identity=24.812030075188, Blast_Score=118, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6321430, Length=567, Percent_Identity=25.2204585537919, Blast_Score=117, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6325221, Length=564, Percent_Identity=25.531914893617, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321271, Length=683, Percent_Identity=23.1332357247438, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319772, Length=543, Percent_Identity=24.1252302025783, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6321432, Length=173, Percent_Identity=29.4797687861272, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221329854, Length=177, Percent_Identity=35.0282485875706, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24668696, Length=196, Percent_Identity=30.1020408163265, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24668704, Length=180, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI161085803, Length=199, Percent_Identity=29.6482412060301, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI24668708, Length=180, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI281366617, Length=180, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006391 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 73912; Mature: 73781
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIPSNSRSRGLTGTQARQALPGALRKLDPRFQWRNPVMFLVWIGAVLTTIIAGLELLT CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVTDGGVSVGFSMAIAVWLWLTVIFANLAESIAEGRGKAQAESLRKTRTATSAIRVDGWD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCC ERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDIVWGIASVDESAITGESAPVV CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCCC RESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMIALVEGSGRQKTLNEIALNILLA CCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SLSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHN HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VLAMSGRAVEAAGDVTTLLLDKTGTITYGNRRASEFIPMPGVSDKEIRDAAARSSLADPT HHEECCCEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC PEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDLPDGTKIRKGAGSAVRAWLTE CCCCHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH SHINMDIDTLAHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVHLKDIVKEGLTDRFA CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHH ELRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGD HHHHCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECC GTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTF CCCCCCCHHHCCCCEEECCCCHHHHHCCCEEECCCCHHHHHHHHCCCHHHEEECCCHHHH SIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVLSAIIFNAIIIVILVPLALKG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC VAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF CCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVIPSNSRSRGLTGTQARQALPGALRKLDPRFQWRNPVMFLVWIGAVLTTIIAGLELLT CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVTDGGVSVGFSMAIAVWLWLTVIFANLAESIAEGRGKAQAESLRKTRTATSAIRVDGWD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCC ERNDPSAEHTTTTEVVSSELRYGDVVVVAAGQTIPGDGDIVWGIASVDESAITGESAPVV CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCCC RESGGDRSAVTGGTTVLSDRIVVKITSKPGQSFVDRMIALVEGSGRQKTLNEIALNILLA CCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SLSIVFVLVTLTLNPIASLAARPVSVTVLVALLVCLVPTTIGALLSAIGIAGMDRLVQHN HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VLAMSGRAVEAAGDVTTLLLDKTGTITYGNRRASEFIPMPGVSDKEIRDAAARSSLADPT HHEECCCEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC PEGTSIVDLAREQGFVPDACGEQGKVVPFTAQTRMSGIDLPDGTKIRKGAGSAVRAWLTE CCCCHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH SHINMDIDTLAHMDRRVDSVSQSGGTPLVVAVRTPDHSGKVLGVVHLKDIVKEGLTDRFA CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHH ELRRMGIRTVMVTGDNPLTAAAIAKEAGVDDFLAEATPEDKLAYIRKEQEGGRMVAMTGD HHHHCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECC GTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLISIVGIGKQLLITRGALTTF CCCCCCCHHHCCCCEEECCCCHHHHHCCCEEECCCCHHHHHHHHCCCHHHEEECCCHHHH SIANDIAKYFAIIPAIFMATYPGLSALNIMGLHSPASAVLSAIIFNAIIIVILVPLALKG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC VAYKPAGASKILARNLRIYGLGGVVAPFIGIWLIDLIIRLIPGF CCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]