| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841584
Identifier: 50841584
GI number: 50841584
Start: 107367
End: 108500
Strand: Reverse
Name: 50841584
Synonym: PPA0093
Alternate gene names: NA
Gene position: 108500-107367 (Counterclockwise)
Preceding gene: 50841587
Following gene: 50841583
Centisome position: 4.24
GC content: 64.81
Gene sequence:
>1134_bases GTGCCTACTTCCTCCGCCGGATCGCACCGCGCCTGGCTCATGGTCGGAGCCGGTATCTCTCTACTTGCCGGCCTCGACGG CGCCCTGCTACTACTCGGAGTGTGGTCACCGGTGATGTCGACGCGACTATCCAAGTGGCATGGACCCCTCATGGTGCTCG GGTTCGTTGGGACCGTCATCTGTCTGGAACGTGCGGTGGCCCTCGGCCATCGCCTCGCCTACCTCGTCCCGGCCATGTCC GGGTTTGGCGTCATCGTCCTGCTGGCGCCTCTGCCCTTCGACTCCGCCCGCGCCGGGCTTGCTCTGCTCACTCTTGCCCA ATTGGGGCTGCTGACCATCTACGTCCCCCTATGGCGGCGCAGTCACGACGACGCCGTCGTCATCCAGGGCGCTGGAGCCT TCTGCGCCGCCGGGGCCGCTGCCCTCCTGACAACCGGGGCACACGTCTCCCAGATCGTCGGATGGCTGGCCTGTTACATG ATCCTGACGATCTGCGGGGAGAGGCTGGAGCTGTCACGACTGACGATGGCGCGTAATCGCGCCTTGTCAGCTTTGTGCCT GGCGGTGGTAGCAGCCCTACTCGTCTCGGTGGTCAGCCCGGCGATCGGATGGCGAGTACTCGGTGTGGTACTCATCGGAC TGGCGGTGTGGTTATGCCGCCATGACGTTGCCCGTGGCGGCCTGAGACGCGGCGGCCAGGCCGCTTACATTGGCACCCTG CTCATGATCGGCTACCTGTGGCTCGCAACAGCCGGTATCGTCTGCACGATTCAAGGACCACCCACTTCCCGAAATGGGTA TGACGCCGTCGTCCACTCGCTCTTCCTCGGATTCACCATGGGGATGATCCTCGGCCACGCCCCCATCATCCTGCCCGCCG TGTTGCAGGTCCGGCTGGAATGGACGACGTGGTTCTGGCTCCCAGCCTTCCTGTTGGAGGCCTCCCTGCTGGTGCGCATC GGTATCGGCGACGGTTTGGACCGTTCCGCCGCGGTGCAGGCGGGCGGGACCGTCAACGTACTCAGCCTATTGACCCTGGT AGCTGTCATCGCCACCCATATCCAGCCCCGCACCAGGGCCAGAACGCACCTGAAATCTACTCCACGCTCCCGGTCAGGAG AGGACCATGCCTGA
Upstream 100 bases:
>100_bases AAGGACCCTACTTACTCCTGCCATCCCAGGTGGAATAGGTAGAAAGGGCCTCGGCGCACATAGTATTTTGAGGATACGAT AGCCGAAAAAGGATTCTCCT
Downstream 100 bases:
>100_bases GATCACATCCGCGCCCGTCGGTCGCAAACCCGACACGAATAAGCGCAGTTGGCACCGTAAAGCGTCACGTCCGGTATCAG GGTGGCTGGTAGCCCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVICLERAVALGHRLAYLVPAMS GFGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRRSHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYM ILTICGERLELSRLTMARNRALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTL LMIGYLWLATAGIVCTIQGPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLEWTTWFWLPAFLLEASLLVRI GIGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRARTHLKSTPRSRSGEDHA
Sequences:
>Translated_377_residues MPTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVICLERAVALGHRLAYLVPAMS GFGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRRSHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYM ILTICGERLELSRLTMARNRALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTL LMIGYLWLATAGIVCTIQGPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLEWTTWFWLPAFLLEASLLVRI GIGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRARTHLKSTPRSRSGEDHA >Mature_376_residues PTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVICLERAVALGHRLAYLVPAMSG FGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRRSHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYMI LTICGERLELSRLTMARNRALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTLL MIGYLWLATAGIVCTIQGPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLEWTTWFWLPAFLLEASLLVRIG IGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRARTHLKSTPRSRSGEDHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39798; Mature: 39667
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVI CCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH CLERAVALGHRLAYLVPAMSGFGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRR HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC SHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYMILTICGERLELSRLTMARNR CCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LMIGYLWLATAGIVCTIQGPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLE HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WTTWFWLPAFLLEASLLVRIGIGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRA HHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH RTHLKSTPRSRSGEDHA HHHHHCCCCCCCCCCCC >Mature Secondary Structure PTSSAGSHRAWLMVGAGISLLAGLDGALLLLGVWSPVMSTRLSKWHGPLMVLGFVGTVI CCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH CLERAVALGHRLAYLVPAMSGFGVIVLLAPLPFDSARAGLALLTLAQLGLLTIYVPLWRR HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC SHDDAVVIQGAGAFCAAGAAALLTTGAHVSQIVGWLACYMILTICGERLELSRLTMARNR CCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALSALCLAVVAALLVSVVSPAIGWRVLGVVLIGLAVWLCRHDVARGGLRRGGQAAYIGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LMIGYLWLATAGIVCTIQGPPTSRNGYDAVVHSLFLGFTMGMILGHAPIILPAVLQVRLE HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WTTWFWLPAFLLEASLLVRIGIGDGLDRSAAVQAGGTVNVLSLLTLVAVIATHIQPRTRA HHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH RTHLKSTPRSRSGEDHA HHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA