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The map label for this gene is yurN [H]

Identifier: 50841577

GI number: 50841577

Start: 97276

End: 98211

Strand: Direct

Name: yurN [H]

Synonym: PPA0086

Alternate gene names: 50841577

Gene position: 97276-98211 (Clockwise)

Preceding gene: 50841576

Following gene: 50841578

Centisome position: 3.8

GC content: 56.52

Gene sequence:

>936_bases
TTGACTCTTCCCATAGCGACTGTTCCAGCCGGCCGCCGGGCCCGCCGCCGCACGCCTATGGGTGGTGGTGGCCCCTTTGC
TGCATTGTGCATTCTGCCGGCGCTGGTCCTTTATGTACTTTTCCTCGTCTATCCGACGCTCAACGTATTCCATATGTCGT
TGTTCGACTGGAATGGGCTGGGAAATGCCCCTAGCTTCATCGGGCTAGACAACTTCGCCGCCCTCATCCACGATCCCGCT
TTCGTCCGGGCGTTTGAGAACACATTGTTTATCCTCGTCGTAGTGACGATTGTGACCATTTGCAGTTCCATCTTTATCGC
GGCGGTCCTCACTCGGGAGACCTTGGTGGGAGCTGGCTGGTACCGGTTTGTGCTTTACCTGCCGTCGGTGCTGTCCATCG
TCGTCGTGGCAGCCATCTTCTCGGCAGTTTTCGATCAAAACAACGGACTGGTGAACGGCCTCCTGCAAGCGCTGGGACTG
GGACACGGGCCAGTCTGGCTCGGCGATCAGAACGTGGTTATGTACTCCGTTGCCATCGCCATGGTCTGGCAATCGCTCGG
CTACTACGTGGTGCTCTACATGGCCGGCATGTCGTCGGTGCCAGTCGAGATCTACGAATCGGCCTCGCTGGATGGTGCCG
GGCGGATGACTCAGTTGGGATCGATCACCATTCCCCTAATTTGGAGCAACATCCGTACCACCCTCACCTTCTTCGTGCTG
AGTTCGGTGAATCTCGCCTTCGTGCTGGTTAAGGCTCTGACTGATGGTGGGCCCAACGGTAGCTTGGAGGTGCTGCTCAA
TTACATGTATAAGCAGGCGTTCACTAACTCAGCTTATGGTTACGGTATGGCGATTGGCGTGGTGACCTTCCTGTTCTCGT
TCCTCGTCGCGATGCTGATCAGCCACGTGACTCGCAGAGAAGTTCTTCAGTACTAA

Upstream 100 bases:

>100_bases
GTCAAGGACTGGCAGGCGAAGGTCAACGAGGCCAGCAACAAGCTGGGCGGTTACTGACCCCTGATCCCTCTGTGCTGATC
ATGGATGAATCGAGGCTGTC

Downstream 100 bases:

>100_bases
TGAGCGCCGTCCCGACCCCCTCGCGTGCCGACCGGCGCTACCGACTGGCCGCCCACGCCCTTCTAGTGATCATCAGCATT
CTCATCATCGTCCCGGTGGC

Product: putative permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTLPIATVPAGRRARRRTPMGGGGPFAALCILPALVLYVLFLVYPTLNVFHMSLFDWNGLGNAPSFIGLDNFAALIHDPA
FVRAFENTLFILVVVTIVTICSSIFIAAVLTRETLVGAGWYRFVLYLPSVLSIVVVAAIFSAVFDQNNGLVNGLLQALGL
GHGPVWLGDQNVVMYSVAIAMVWQSLGYYVVLYMAGMSSVPVEIYESASLDGAGRMTQLGSITIPLIWSNIRTTLTFFVL
SSVNLAFVLVKALTDGGPNGSLEVLLNYMYKQAFTNSAYGYGMAIGVVTFLFSFLVAMLISHVTRREVLQY

Sequences:

>Translated_311_residues
MTLPIATVPAGRRARRRTPMGGGGPFAALCILPALVLYVLFLVYPTLNVFHMSLFDWNGLGNAPSFIGLDNFAALIHDPA
FVRAFENTLFILVVVTIVTICSSIFIAAVLTRETLVGAGWYRFVLYLPSVLSIVVVAAIFSAVFDQNNGLVNGLLQALGL
GHGPVWLGDQNVVMYSVAIAMVWQSLGYYVVLYMAGMSSVPVEIYESASLDGAGRMTQLGSITIPLIWSNIRTTLTFFVL
SSVNLAFVLVKALTDGGPNGSLEVLLNYMYKQAFTNSAYGYGMAIGVVTFLFSFLVAMLISHVTRREVLQY
>Mature_310_residues
TLPIATVPAGRRARRRTPMGGGGPFAALCILPALVLYVLFLVYPTLNVFHMSLFDWNGLGNAPSFIGLDNFAALIHDPAF
VRAFENTLFILVVVTIVTICSSIFIAAVLTRETLVGAGWYRFVLYLPSVLSIVVVAAIFSAVFDQNNGLVNGLLQALGLG
HGPVWLGDQNVVMYSVAIAMVWQSLGYYVVLYMAGMSSVPVEIYESASLDGAGRMTQLGSITIPLIWSNIRTTLTFFVLS
SVNLAFVLVKALTDGGPNGSLEVLLNYMYKQAFTNSAYGYGMAIGVVTFLFSFLVAMLISHVTRREVLQY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=255, Percent_Identity=29.8039215686275, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790465, Length=252, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=24.2063492063492, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33763; Mature: 33632

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPIATVPAGRRARRRTPMGGGGPFAALCILPALVLYVLFLVYPTLNVFHMSLFDWNGL
CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GNAPSFIGLDNFAALIHDPAFVRAFENTLFILVVVTIVTICSSIFIAAVLTRETLVGAGW
CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
YRFVLYLPSVLSIVVVAAIFSAVFDQNNGLVNGLLQALGLGHGPVWLGDQNVVMYSVAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH
MVWQSLGYYVVLYMAGMSSVPVEIYESASLDGAGRMTQLGSITIPLIWSNIRTTLTFFVL
HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHH
SSVNLAFVLVKALTDGGPNGSLEVLLNYMYKQAFTNSAYGYGMAIGVVTFLFSFLVAMLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SHVTRREVLQY
HHHHHHHHHCC
>Mature Secondary Structure 
TLPIATVPAGRRARRRTPMGGGGPFAALCILPALVLYVLFLVYPTLNVFHMSLFDWNGL
CCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC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HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]