| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is fhs [H]
Identifier: 50841539
GI number: 50841539
Start: 47426
End: 49135
Strand: Direct
Name: fhs [H]
Synonym: PPA0049
Alternate gene names: 50841539
Gene position: 47426-49135 (Clockwise)
Preceding gene: 50841537
Following gene: 50841540
Centisome position: 1.85
GC content: 60.82
Gene sequence:
>1710_bases ATGATTGGAGCTATGACAATGAAGTCGGATCTTGAAATTGCCCGCGAGGCCCACCTTGACCCCATCGAGAAGGTTGCAGC CCGGGCAGGCATTGATGAGAAATACCTGGAGCCCTATGGGCGCGGCGTCGCGAAGGTGGACCTCGATGTCGTCACACACA ACAGGGATCATTCTTGCGGTAAATACGTCGTCGTCACGGCCATGACTCCCACGCCTCTTGGTGAGGGCAAAACGACCACC GCTGTTGGTCTAGCCCAGGGCCTAGAGAAGATCGGCAAACATAGCGTGCTGGCCCTACGCCAGCCGTCGATGGGCCCAAC TTTCGGAATCAAGGGCGGTGCCGCTGGCGCTGGATACTCCCAGGTGCTGCCGATGGAGAAGCTCAATTTGCACCTGACTG GTGACTTCCATGCCATTGGAGCGGCCCACAACCTGCTTGCCGCCATGATCGACAACCATCTGCACCAGGGCAACGAGCTC GACATTGAACCTCACTCGATCTCGTGGCGTCGCGTCGTCGATATCAATGACCGTGCCCTGCGCAACACCATTGTTGGTCT TGGATCGAGGGTCGACGGCGTCCCCCGCGAGACCGGATTCGATATCACCGCGGCTAGCGAGGTTGGCGTCATCCTGTCCT TGGCCACCTCCTTGTCCGACCTGCGTGCTCGCCTGGGGCGTATCGTCATCGGCTATAACCGCTCCAAAGAGCCAGTCAGC GCCGAGGATCTGCACGCCGCCGGATCGATGGCCGTCATTCTTAAAGACGCCCTCAAGCCAAACCTATTACAAACTACCGA GAACAGCCCGGTGCTCGTTCACGCCGGCCCCTTTGGCAATATCGCCACCGGTAACTCCTCGGTCATCGCAGACCGCGTCG GTATCGGTTGCGGCGATTACTTGCTCACCGAGGCCGGATTCGGTGCTGACATGGGAGCTGAGCGGTTCTTCAACATCAAA TGCCGCATCGGTGGGATGCGCCCCGACGCTGCCGTCCTCGTCGCCACCGTGCGTGCCCTCAAAACCCACGCCGGTCGCTA CAAAGTCATCCCCGGAAAGCCCCTGCCCCCGGCAATGCTGGAGGACAACCCTGACGACGTGCTCGCTGGTGCTGCCAATC TGCGCAAACACATCGAGATTGTGCGTGAGTTCGGCGTCTCCCCGATTGTGGCTCTCAACGTTTTCCCGACCGATCACCCC GATGAGATCGATGCCGTCCGTAAAGTCGCTGAGGCCGCCGGAGCCCATTTCGCCTCTTCGACCCATGTCGTCGATGGCGG TGACGGTGCCGTCGACCTGGCTCACGCGGTCGTGGCAGCCTGTGACCACAAGGCCGACTTCCGCTACACCTACGACCTTG AGGACTCTCTAGTCGAGAAACTGACCAAGGTTGCTACCAAGGTTTATGGGGCTGACGGAATCGACATCGCCCCAGCGGCA GCCAAGGAGCTGGCCCACTTCGAGGATCTCGGCTACGGCACATTCCCGGTTGTCATCGCGAAGACCCACCTATCCCTGTC CCATGACCCATCCCTCAAGGGCGCCCCGACCGGATGGCGGTTGCCTGTGCGCGAGGTGAGGGCCGCCGTCGGAGCTGGAT ACATCTACGCGATCTGCGGCGACATGCGCACCATGCCGGGCTTGGGCCGTCACCCGGCCGCCGAGAGGATAGATATCGAC GATAACGGCGAAACCATCGGACTGTTCTGA
Upstream 100 bases:
>100_bases GGCAGCGGAACGCTACGCTGCTGTGGCGTCAGGTGAGCGTTGGTAACGGTCCGGGCCGGCCATGATGCGCACAGGTATGC AAAGAGGTGTCCAACACGTC
Downstream 100 bases:
>100_bases CGTCAACGGTTCGGGGGCGCGCAGTGGTGCCGCGTCCCCAAGCTGGTTCCAACCATCGGCGTTGTGTAACGCCTCCGGAC AACACAGTTCAGGCTTGTTG
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCGKYVVVTAMTPTPLGEGKTTT AVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYSQVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNEL DIEPHSISWRRVVDINDRALRNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDYLLTEAGFGADMGAERFFNIK CRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAMLEDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHP DEIDAVRKVAEAAGAHFASSTHVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICGDMRTMPGLGRHPAAERIDID DNGETIGLF
Sequences:
>Translated_569_residues MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCGKYVVVTAMTPTPLGEGKTTT AVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYSQVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNEL DIEPHSISWRRVVDINDRALRNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDYLLTEAGFGADMGAERFFNIK CRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAMLEDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHP DEIDAVRKVAEAAGAHFASSTHVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICGDMRTMPGLGRHPAAERIDID DNGETIGLF >Mature_569_residues MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCGKYVVVTAMTPTPLGEGKTTT AVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYSQVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNEL DIEPHSISWRRVVDINDRALRNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDYLLTEAGFGADMGAERFFNIK CRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAMLEDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHP DEIDAVRKVAEAAGAHFASSTHVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICGDMRTMPGLGRHPAAERIDID DNGETIGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=618, Percent_Identity=45.7928802588997, Blast_Score=502, Evalue=1e-142, Organism=Homo sapiens, GI36796743, Length=618, Percent_Identity=45.4692556634304, Blast_Score=494, Evalue=1e-140, Organism=Homo sapiens, GI310124614, Length=84, Percent_Identity=42.8571428571429, Blast_Score=84, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=46.4630225080386, Blast_Score=491, Evalue=1e-139, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=46.4630225080386, Blast_Score=491, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6321643, Length=625, Percent_Identity=45.12, Blast_Score=503, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6319558, Length=630, Percent_Identity=44.4444444444444, Blast_Score=501, Evalue=1e-142, Organism=Drosophila melanogaster, GI62472483, Length=619, Percent_Identity=44.5880452342488, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI45551871, Length=619, Percent_Identity=44.5880452342488, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI24645718, Length=619, Percent_Identity=44.5880452342488, Blast_Score=486, Evalue=1e-137, Organism=Drosophila melanogaster, GI17137370, Length=619, Percent_Identity=44.5880452342488, Blast_Score=486, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 60266; Mature: 60266
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCG CCCCEECHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEEECCCCCCCC KYVVVTAMTPTPLGEGKTTTAVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYS CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHH QVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNELDIEPHSISWRRVVDINDRAL HCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH RNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS HHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCC AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDY HHHHHCCCCHHEEEHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEHHHCCCCCHH LLTEAGFGADMGAERFFNIKCRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAML HHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHC EDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHPDEIDAVRKVAEAAGAHFASS CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC THVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA CEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHH AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICG HHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC DMRTMPGLGRHPAAERIDIDDNGETIGLF CHHCCCCCCCCCCCCEEEECCCCCEEECC >Mature Secondary Structure MIGAMTMKSDLEIAREAHLDPIEKVAARAGIDEKYLEPYGRGVAKVDLDVVTHNRDHSCG CCCCEECHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEEECCCCCCCC KYVVVTAMTPTPLGEGKTTTAVGLAQGLEKIGKHSVLALRQPSMGPTFGIKGGAAGAGYS CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHH QVLPMEKLNLHLTGDFHAIGAAHNLLAAMIDNHLHQGNELDIEPHSISWRRVVDINDRAL HCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH RNTIVGLGSRVDGVPRETGFDITAASEVGVILSLATSLSDLRARLGRIVIGYNRSKEPVS HHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCC AEDLHAAGSMAVILKDALKPNLLQTTENSPVLVHAGPFGNIATGNSSVIADRVGIGCGDY HHHHHCCCCHHEEEHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEHHHCCCCCHH LLTEAGFGADMGAERFFNIKCRIGGMRPDAAVLVATVRALKTHAGRYKVIPGKPLPPAML HHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHC EDNPDDVLAGAANLRKHIEIVREFGVSPIVALNVFPTDHPDEIDAVRKVAEAAGAHFASS CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC THVVDGGDGAVDLAHAVVAACDHKADFRYTYDLEDSLVEKLTKVATKVYGADGIDIAPAA CEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHH AKELAHFEDLGYGTFPVVIAKTHLSLSHDPSLKGAPTGWRLPVREVRAAVGAGYIYAICG HHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC DMRTMPGLGRHPAAERIDIDDNGETIGLF CHHCCCCCCCCCCCCEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA