| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841537
Identifier: 50841537
GI number: 50841537
Start: 42904
End: 45666
Strand: Direct
Name: 50841537
Synonym: PPA0047
Alternate gene names: NA
Gene position: 42904-45666 (Clockwise)
Preceding gene: 50841536
Following gene: 50841539
Centisome position: 1.68
GC content: 62.76
Gene sequence:
>2763_bases ATGAAGATCTCACCTGTCCGTGCCCGAATACACGGCGCCCTGGCCATGGTTGCCCTCCTCCTTCTGGTGGTGGGCTCCCC AGCCGCTCTCGTGGCATGGGGACACCTCGACGCCACCACCGTGTTGAGCCCAGCAGGATGGCTAGCCCCTGATGACGGGT CGATTTTCCTCACCGTTGTGACTGTGATCGGCTGGGCGGCTTGGACCGTATTCTGTGTCTGCGTCGTTGCCGAGGCCGTC GGAATGGCCACCAGCCAGCGTCATCACGTGAAGCTTCCTGGTCTAGGCGCGATCCAGGGGATTGCGGCAGGACTGCTGGT GGCAAGTCTGACCGTCCTGTCCCCGTTGACGCGATCAGCTGTCCCACCCGCTCCGGTATCGCTAGTGGCTACTGCGGCGG CTGCCCCGCAGCCTGCGCCTGAGGCTCAGGTGGACAGCGACTCTAGGCACGACGAGGACGTCATGACTGTCACAGTTGGC CCGCATGACGACCTGTGGACACTCGCCGAGACCTGGTATGGGGATGGCACTTCATGGCGACGCATCGTTGCTGCCAACCC CGATGTCGACGTTGATCATCTCGTCGTCGGTCAGCGACTCGCTCTTCCGGGAGCCACAGTGACCGTGCCCGCCGGGCACA CTGGCGCCGGTCGCCCGATCGATACTGAGCAACTTAACCAGATCGCTCCCCCGTCGGAGATGTCGAAAATTCGGACCATC ACGGTCGAGCAAGGAGACACCCTTAGCGGGATTGCTCAAACACAGTTGGGGGATGCATCGTCCTGGCCAGCAATCTGGCA TCTCAACGAGGGGATCATCGCGGACCCCGACCACATCGAGCCAGGTTGGGAACTGGTCTTGCCGGACTCCCCAACTGTGG ACAAGCGGGCATCTGACCAGCACACCAATGAGCAAGGCGGCAAGTGGGAAAAATCGACCCCTGCCGAGACTCCGACCACC GAGAGCACTCCGCCCGTGCTACCTGAAGGGGGTGGCGACACCACGGCCACCGTAAATGAGACGAAAGTCGAACCTCACAC GGCTGCCGGGGCGGACCAGGAAGTGAGTGTGGCTGAGGTCGGGCAAAGCCCGGCCGAGATACTTCGGACCGCATTAGCTG GCCTGAGCTTGTTCCTGGCAGGTGGGGTCGCTGGAACAGTCACAACTCGACGCCGGCAGCAGCTTTTCACCCGGCCTCTC GGCAGACGCATACCGCCAGTATCTGGAGAGCCCCGGCGGGCCAAGCGTGTTCTTGACGCCGCCGCAGATCAGCTCGACGA GTCCGCGTCATCGCGGGACACCGCTGCTCTTGCCATGACGCCGACCACCGTCGTGTTGGGAACATGTGACCCTCAGACGC CGGTCGTGGTGGACCTAGCCGATGTTGGCGGGGTACTAGCGGTTAATGCCGCCAGAGACCTGGCTACGGCGATGGTTGCC TCGATCAGCCTGTCCCTTGTTGCGGCGCCGTGGAGCGGCGGAATTGACATCGTAGCGGTGGGTGAGGATCTTGCCTGGCT GGCACATACCGGCAGTGACGATGTCCAACTCGCTGATGAGGACGAGGTTGTCGAGGGGTTAGCTGGTCTTTCCAACGAAG CCAGCGAGTATCCCGCGACGATTACCAGGGTTGTCCTCTCCTTAAGCCCCCTCAACCTTCCGAGCCCGGCCTCCCTTGCT GCAGCGGGCATCGTCATCGTCATGCCCGGGGTAGGCGGCCAAAAGATTACCGTCACCGACTGCGATCATGCGGAGTTCCA CGGCCAGTCGTTTACCCCACAGATCGTCACCTCTCCGATGCGTCGTGCTGTTGTGGAATTGCTTGAGACTACCGCTCGGT CTGATACGGAGCCCGCTCCGTGGTGGGAGCCGCGGCGAGGCGATGAGGAGGGATCCGATCCTCCGCCGGTGATGGACAAG CCCTGCGCTGTGCTGCCACCCAGTGATGCCCATCTGACCGTCGAGGAGGAAACCGTGCTGACGTCGACTATGACGAGTGA TGTTGCCCACCTGCCTGCCACCGGTGGACAGGTGCCGTCGCCCATATTGCGGCTTCTCGGCCCGGTTGACCTGTTGGGGG CTCGGGGAAATCCGCCGACGAAGGCTCGACGTCAATGCTTGGAGTACTGCGCCTGGCTGCTGTGCCATCCAGGAGCTCGC TCGGTGCAGATGGCTGACGCACTCATGGTTGCCGAGCCGACCCGGCGCTCCAATGTCTCCCGGCTACGCCGTTGGCTCGG CACCGACGACGCCGGTCGCGCCTATCTTCCGGAGGGATACGACGGTTCATTGCGCCTCGCAGACGCAGTGACAAGTGACT GGGAAAGGCTCGAGCTGTTGGTTTCTGGGGGAGTATCGACGGCTCCGCTAGCCAATCTTGTGAGCGCCCTTGACCTCGTT CGTGGGGCTCCTTTGGCCGATGCCGCACCCGGCCAATGGCACTGGGCCGAGGAATGGCGGATCGACATGATCCAGATGGT TCGCGACATCGGGGTCGAGGTAGCCCGACGAGCTATGGAGATAAGAGACGTTGAGCTGGCATCTCGGGCCCTTGCCAGGG CCACCGTCGCCTGTCCCGAGGACGAGGTGTTGTTAGTGGCCCGCATCAAACTGGCTGACGAGCTCGACGATCGTGGTGAA GTCGAGAGGCTGGTCTACGTGCTGTCTCGTCAGGCCCGACGGCTTGGCGTGGACTTGTCAGAGGAAACCATCACCGTTTT ACAGGAGGTGATGGAAGGTCACGCCCGAGCCAGGGTGGTCTGA
Upstream 100 bases:
>100_bases CCATCAAACTGTCTGACCTTCTCGTCCCGGGAATGCCGGGGTCCTTCCACATCGAGTCGGTGGCCCACTCCACCCTCGAC AGCCATCGGGAGCGATACTC
Downstream 100 bases:
>100_bases GGGCATCTACTAACTATTAGTCGAGGAGCGACGCCCGTGCATGGCGTCATTCTTCGGGGTTAGCGGCGGGCAACCCACCG AGGGCACTACCTTTGTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 920; Mature: 920
Protein sequence:
>920_residues MKISPVRARIHGALAMVALLLLVVGSPAALVAWGHLDATTVLSPAGWLAPDDGSIFLTVVTVIGWAAWTVFCVCVVAEAV GMATSQRHHVKLPGLGAIQGIAAGLLVASLTVLSPLTRSAVPPAPVSLVATAAAAPQPAPEAQVDSDSRHDEDVMTVTVG PHDDLWTLAETWYGDGTSWRRIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKIRTI TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQHTNEQGGKWEKSTPAETPTT ESTPPVLPEGGGDTTATVNETKVEPHTAAGADQEVSVAEVGQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPL GRRIPPVSGEPRRAKRVLDAAADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPATITRVVLSLSPLNLPSPASLA AAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPMRRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDK PCAVLPPSDAHLTVEEETVLTSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELLVSGGVSTAPLANLVSALDLV RGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAMEIRDVELASRALARATVACPEDEVLLVARIKLADELDDRGE VERLVYVLSRQARRLGVDLSEETITVLQEVMEGHARARVV
Sequences:
>Translated_920_residues MKISPVRARIHGALAMVALLLLVVGSPAALVAWGHLDATTVLSPAGWLAPDDGSIFLTVVTVIGWAAWTVFCVCVVAEAV GMATSQRHHVKLPGLGAIQGIAAGLLVASLTVLSPLTRSAVPPAPVSLVATAAAAPQPAPEAQVDSDSRHDEDVMTVTVG PHDDLWTLAETWYGDGTSWRRIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKIRTI TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQHTNEQGGKWEKSTPAETPTT ESTPPVLPEGGGDTTATVNETKVEPHTAAGADQEVSVAEVGQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPL GRRIPPVSGEPRRAKRVLDAAADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPATITRVVLSLSPLNLPSPASLA AAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPMRRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDK PCAVLPPSDAHLTVEEETVLTSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELLVSGGVSTAPLANLVSALDLV RGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAMEIRDVELASRALARATVACPEDEVLLVARIKLADELDDRGE VERLVYVLSRQARRLGVDLSEETITVLQEVMEGHARARVV >Mature_920_residues MKISPVRARIHGALAMVALLLLVVGSPAALVAWGHLDATTVLSPAGWLAPDDGSIFLTVVTVIGWAAWTVFCVCVVAEAV GMATSQRHHVKLPGLGAIQGIAAGLLVASLTVLSPLTRSAVPPAPVSLVATAAAAPQPAPEAQVDSDSRHDEDVMTVTVG PHDDLWTLAETWYGDGTSWRRIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKIRTI TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQHTNEQGGKWEKSTPAETPTT ESTPPVLPEGGGDTTATVNETKVEPHTAAGADQEVSVAEVGQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPL GRRIPPVSGEPRRAKRVLDAAADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPATITRVVLSLSPLNLPSPASLA AAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPMRRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDK PCAVLPPSDAHLTVEEETVLTSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELLVSGGVSTAPLANLVSALDLV RGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAMEIRDVELASRALARATVACPEDEVLLVARIKLADELDDRGE VERLVYVLSRQARRLGVDLSEETITVLQEVMEGHARARVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97196; Mature: 97196
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISPVRARIHGALAMVALLLLVVGSPAALVAWGHLDATTVLSPAGWLAPDDGSIFLTVV CCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHEECCCCCCCCCCCCCHHHHH TVIGWAAWTVFCVCVVAEAVGMATSQRHHVKLPGLGAIQGIAAGLLVASLTVLSPLTRSA HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC VPPAPVSLVATAAAAPQPAPEAQVDSDSRHDEDVMTVTVGPHDDLWTLAETWYGDGTSWR CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCE RIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKIRTI EEEECCCCCCHHHHHHCCEEECCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHEEEE TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQ EEECCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC HTNEQGGKWEKSTPAETPTTESTPPVLPEGGGDTTATVNETKVEPHTAAGADQEVSVAEV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHH GQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPLGRRIPPVSGEPRRAKRVLDA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH AADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA HHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHH SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPAT HHHEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEECCHHHHHHHHHCCCCCHHHHHHH ITRVVLSLSPLNLPSPASLAAAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPM HHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCEEEEECCCCHHHCCCCCCHHHHHHHH RRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDKPCAVLPPSDAHLTVEEETVL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHH TSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR HHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELL CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHH VSGGVSTAPLANLVSALDLVRGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAME HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRDVELASRALARATVACPEDEVLLVARIKLADELDDRGEVERLVYVLSRQARRLGVDLS HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC EETITVLQEVMEGHARARVV HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKISPVRARIHGALAMVALLLLVVGSPAALVAWGHLDATTVLSPAGWLAPDDGSIFLTVV CCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHEECCCCCCCCCCCCCHHHHH TVIGWAAWTVFCVCVVAEAVGMATSQRHHVKLPGLGAIQGIAAGLLVASLTVLSPLTRSA HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC VPPAPVSLVATAAAAPQPAPEAQVDSDSRHDEDVMTVTVGPHDDLWTLAETWYGDGTSWR CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCE RIVAANPDVDVDHLVVGQRLALPGATVTVPAGHTGAGRPIDTEQLNQIAPPSEMSKIRTI EEEECCCCCCHHHHHHCCEEECCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHEEEE TVEQGDTLSGIAQTQLGDASSWPAIWHLNEGIIADPDHIEPGWELVLPDSPTVDKRASDQ EEECCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC HTNEQGGKWEKSTPAETPTTESTPPVLPEGGGDTTATVNETKVEPHTAAGADQEVSVAEV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHH GQSPAEILRTALAGLSLFLAGGVAGTVTTRRRQQLFTRPLGRRIPPVSGEPRRAKRVLDA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH AADQLDESASSRDTAALAMTPTTVVLGTCDPQTPVVVDLADVGGVLAVNAARDLATAMVA HHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHH SISLSLVAAPWSGGIDIVAVGEDLAWLAHTGSDDVQLADEDEVVEGLAGLSNEASEYPAT HHHEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEECCHHHHHHHHHCCCCCHHHHHHH ITRVVLSLSPLNLPSPASLAAAGIVIVMPGVGGQKITVTDCDHAEFHGQSFTPQIVTSPM HHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCEEEEECCCCHHHCCCCCCHHHHHHHH RRAVVELLETTARSDTEPAPWWEPRRGDEEGSDPPPVMDKPCAVLPPSDAHLTVEEETVL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHH TSTMTSDVAHLPATGGQVPSPILRLLGPVDLLGARGNPPTKARRQCLEYCAWLLCHPGAR HHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC SVQMADALMVAEPTRRSNVSRLRRWLGTDDAGRAYLPEGYDGSLRLADAVTSDWERLELL CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHH VSGGVSTAPLANLVSALDLVRGAPLADAAPGQWHWAEEWRIDMIQMVRDIGVEVARRAME HCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRDVELASRALARATVACPEDEVLLVARIKLADELDDRGEVERLVYVLSRQARRLGVDLS HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC EETITVLQEVMEGHARARVV HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA