Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50841535

Identifier: 50841535

GI number: 50841535

Start: 41739

End: 42401

Strand: Direct

Name: 50841535

Synonym: PPA0044

Alternate gene names: NA

Gene position: 41739-42401 (Clockwise)

Preceding gene: 50841534

Following gene: 50841536

Centisome position: 1.63

GC content: 60.18

Gene sequence:

>663_bases
ATGACTACGTTTCGCACCCTCGAATCCCCGACCTGTTGCGGGGTACACGACGTCACCGGAAAGGCCGGTGCGAATGACCA
AGGAGGTCGCCATGAAACACGTCAATACCGTTGCTTCGGTCGTTCTGCCGATGATCGCGGGGATACCCCCTCTCGTCGAG
AAACGCGACGAGAGAGGACTCAGCCAGTCAACCGAAAACGCCATCTTGTTAGTGGGGGCGGTCTCGATAGCGACGGTGGT
TGTCACCGTGATCAAGGGCTATGTGTCGTCAAACTTGCCGAAATGAGTCGGGGTCGATCGGAGCATCGACAGTGCCGGGA
GCGTGGAGTTTCCGAATCCCTTCAGTGGTCGCTGGTGTGGCCCGTCGTCCTGCTGGTAGTTGTTGCGGTCATTCAGACCG
CGGTCGTCCTTCAGGCACGGGCTACCGTCACCGAAGCGGCTCGAGCAGCAGTTCGCGTCCAAGCTTTACGAGGTTCGCAC
GCTGGTGAAGCCGAGGCTACCGCGCGCGATGTCGCCCAGACCTCGAAGGTGACCGACGTCACCGTCACGGTGAGTACGAC
TGATTCTCTCGTCAGAGTCGATGTTGAAGGACGAGCCGCAGCGCTCTTTGGTGCTGTTGTCGCGGTGAGAGGGCATGCTG
TCGCCGTCGAGGAGGGGACATGA

Upstream 100 bases:

>100_bases
CGGCTTCGGAATCCCTGACGATTTGGATGGTCATCCCCGTCCTTGTTTTGGGCTTGGTGCTTATCACCCCACCGCTATTG
ATCATGGCGGGGGTCGCCTC

Downstream 100 bases:

>100_bases
TCCGGCCTTTCCATGGGCGAGCGCTGTTGCCTCAAGACCGCATCGACCAGATACGGTATCGACGCTGCAACGCCTGCCAG
AACAGACGCCATTGGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTTFRTLESPTCCGVHDVTGKAGANDQGGRHETRQYRCFGRSADDRGDTPSRRETRRERTQPVNRKRHLVSGGGLDSDGG
CHRDQGLCVVKLAEMSRGRSEHRQCRERGVSESLQWSLVWPVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSH
AGEAEATARDVAQTSKVTDVTVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT

Sequences:

>Translated_220_residues
MTTFRTLESPTCCGVHDVTGKAGANDQGGRHETRQYRCFGRSADDRGDTPSRRETRRERTQPVNRKRHLVSGGGLDSDGG
CHRDQGLCVVKLAEMSRGRSEHRQCRERGVSESLQWSLVWPVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSH
AGEAEATARDVAQTSKVTDVTVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT
>Mature_219_residues
TTFRTLESPTCCGVHDVTGKAGANDQGGRHETRQYRCFGRSADDRGDTPSRRETRRERTQPVNRKRHLVSGGGLDSDGGC
HRDQGLCVVKLAEMSRGRSEHRQCRERGVSESLQWSLVWPVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSHA
GEAEATARDVAQTSKVTDVTVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23626; Mature: 23495

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFRTLESPTCCGVHDVTGKAGANDQGGRHETRQYRCFGRSADDRGDTPSRRETRRERT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHC
QPVNRKRHLVSGGGLDSDGGCHRDQGLCVVKLAEMSRGRSEHRQCRERGVSESLQWSLVW
CCCCHHHHEECCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHCCCCHHHHHHHHH
PVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSHAGEAEATARDVAQTSKVTDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEE
TVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT
EEEEECCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
TTFRTLESPTCCGVHDVTGKAGANDQGGRHETRQYRCFGRSADDRGDTPSRRETRRERT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHC
QPVNRKRHLVSGGGLDSDGGCHRDQGLCVVKLAEMSRGRSEHRQCRERGVSESLQWSLVW
CCCCHHHHEECCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHCCCCHHHHHHHHH
PVVLLVVVAVIQTAVVLQARATVTEAARAAVRVQALRGSHAGEAEATARDVAQTSKVTDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEE
TVTVSTTDSLVRVDVEGRAAALFGAVVAVRGHAVAVEEGT
EEEEECCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA