| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841534
Identifier: 50841534
GI number: 50841534
Start: 40840
End: 41742
Strand: Direct
Name: 50841534
Synonym: PPA0043
Alternate gene names: NA
Gene position: 40840-41742 (Clockwise)
Preceding gene: 50841533
Following gene: 50841535
Centisome position: 1.6
GC content: 61.35
Gene sequence:
>903_bases ATGGCTGAGTCCACCGTCATCCTCGCTGCTATCTGTGGGGCTTTGCTGGCATGCGCTCCAGTCTTTGTCGTTTCCGGACG ACGCAATGCGCCTTTGAGATTGTCCGACGCCTTGGCGGGGCTGTCCGATTATGGACGTCAGGACGCCGTCGTCGGTCCCG TCGCGGAGGGCGGACGGTTGGAGCGGTGGGGAACGCGAGCAGCAATCCGCTGGCCGCGGATGGTGAGCGAGCGATCTCGT CGCACCCTCATATTGCAGGGGAGAACTCCTGGTGATCTGGTGATCGAGAAGGCCGTCATGGCTATGGGAGGGATGCTCGT CCCGGCCTTGGCACGGGCTGTGGCTGCTGCCTGCGGGGACACTCTGCCGGTGACTCCAGTTGGTTTGGCGGTGGTTCTTG CTGTCGTCGGGTGGTTTATTCCCGACACCCGGATCAGGTCACGGTCTAAAGCAGTGCGTCAGGATGCCGCCGAGGCCGTC TTGGTCTATGTCGATCTCGTCACCCTTGCTCGATTGGCTAACCAGTCAGCTCCGCGGGCCCTCGTCGAGGCGGCGCAGAT GAGTGATCACCCTGTCTTGGCGCGCATTCGTATGACGCTGGAGCGCTCCCGGTTGGAGCAGCAGTCCCCATGGGCTGGTC TCGACGAGTTGTCAGATGAACTTGATCTGCCAGAACTTGCCGAACTCGTTGAGGTATTGCGACTCGATGACCAGGGAGCA TCCCTCGCCGGAGCACTGCGCGCTCGAGTCCATGAGATGAGGGACGCTCACCTCAATCAGGAGAAGGTCGAGGCCCAGAC GGCTTCGGAATCCCTGACGATTTGGATGGTCATCCCCGTCCTTGTTTTGGGCTTGGTGCTTATCACCCCACCGCTATTGA TCATGGCGGGGGTCGCCTCATGA
Upstream 100 bases:
>100_bases TACGCAGGTCTTTACCTCGCCGGCTTGATCGCTCTATCCCGGCGTAGCAAACCGCGACGTCGTGCCCGGATCCTCCTTCG GCGTGCAGGGGAGGCCAACT
Downstream 100 bases:
>100_bases CTACGTTTCGCACCCTCGAATCCCCGACCTGTTGCGGGGTACACGACGTCACCGGAAAGGCCGGTGCGAATGACCAAGGA GGTCGCCATGAAACACGTCA
Product: membrane associated protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAESTVILAAICGALLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRLERWGTRAAIRWPRMVSERSR RTLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGDTLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEAV LVYVDLVTLARLANQSAPRALVEAAQMSDHPVLARIRMTLERSRLEQQSPWAGLDELSDELDLPELAELVEVLRLDDQGA SLAGALRARVHEMRDAHLNQEKVEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS
Sequences:
>Translated_300_residues MAESTVILAAICGALLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRLERWGTRAAIRWPRMVSERSR RTLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGDTLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEAV LVYVDLVTLARLANQSAPRALVEAAQMSDHPVLARIRMTLERSRLEQQSPWAGLDELSDELDLPELAELVEVLRLDDQGA SLAGALRARVHEMRDAHLNQEKVEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS >Mature_299_residues AESTVILAAICGALLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRLERWGTRAAIRWPRMVSERSRR TLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGDTLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEAVL VYVDLVTLARLANQSAPRALVEAAQMSDHPVLARIRMTLERSRLEQQSPWAGLDELSDELDLPELAELVEVLRLDDQGAS LAGALRARVHEMRDAHLNQEKVEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32103; Mature: 31972
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESTVILAAICGALLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCC ERWGTRAAIRWPRMVSERSRRTLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGD HHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC TLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEAVLVYVDLVTLARLANQSAPRA CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVEAAQMSDHPVLARIRMTLERSRLEQQSPWAGLDELSDELDLPELAELVEVLRLDDQGA HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCH SLAGALRARVHEMRDAHLNQEKVEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC >Mature Secondary Structure AESTVILAAICGALLACAPVFVVSGRRNAPLRLSDALAGLSDYGRQDAVVGPVAEGGRL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCC ERWGTRAAIRWPRMVSERSRRTLILQGRTPGDLVIEKAVMAMGGMLVPALARAVAAACGD HHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC TLPVTPVGLAVVLAVVGWFIPDTRIRSRSKAVRQDAAEAVLVYVDLVTLARLANQSAPRA CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVEAAQMSDHPVLARIRMTLERSRLEQQSPWAGLDELSDELDLPELAELVEVLRLDDQGA HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCH SLAGALRARVHEMRDAHLNQEKVEAQTASESLTIWMVIPVLVLGLVLITPPLLIMAGVAS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA