| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is manA [H]
Identifier: 50841502
GI number: 50841502
Start: 8304
End: 9491
Strand: Direct
Name: manA [H]
Synonym: PPA0008
Alternate gene names: 50841502
Gene position: 8304-9491 (Clockwise)
Preceding gene: 50841501
Following gene: 50841503
Centisome position: 0.32
GC content: 58.59
Gene sequence:
>1188_bases ATGCGTGCACTGACAGGACAGGTCCAGCATTACGACTGGGGATCCGCTGACGCCATTCCCGCCATCCTTGGGACTAGACC CGATGGCACCCCGTGGGCCGAGTACTGGCTGGGAGCCCACCCCAAAGCTCCATCGGCCCTACCGGACGGCACACCTCTGG ATCAGTGGTTGACACATCACCCCGACGAGCTGGGAGCTGGGAGCCGCGAGGCCTTCGGTGACCGTCTGCCTTTTTTGCTG AAAATCCTGTCTGCCAATCATGCCCTGAGTATCCAGGCTCACCCTTCACGGGAACAGGCCGAGAAGGGGTTCGCCGCCGA GAACGAAGCAGGGGTTCCCCTTGATGCCCCCAACCGTATCTTTCGTGACGACTGGCCCAAGCCCGAGATGATCGTCGCCC TTACTGATTTCGATGCCCTGTGTGGGTTCCGCGATCCATCCTCGTCCCTGGTATTGCTATCGGGTCTGGGTGAAGTCGAT GGACTGAACGAGGTGCTGACACCACTGAGCCAAAACGATGGCCTGGCCACGCTCGTGGCGGCAGTGCTGTCAGGTGACGA CGATGTGACTCCGGTCGTCAAAAGGGTCGTGTCTGCCTCTCGCGCCTACCTCAATGACGGTGCAGATGAAGACGTCCGCA GCCTAGCCACCACCGCCGTCGAGCTGTGGGAGGACCATCCCGGAGACCCGTCCATTCTTGTCGCTCTGCTGATGAACCGG GTGCGATTGGCTCCCGGTCAGCAAATTCACCTGTGCGCCGGAAGTATGCACGCCTATCTTGGTGGCACTGGTGTGGAAAT TATGGCTAATTCTGACAATGTTTTGCGTGGTGGTCTGACGAGCAAGTACATCGACGTCAAGGCCTTATTAGACCACGCCA ACATGACTCCTGAGCCGTGCGTTGGTGAGTATGCTCAGCAAATATCTCCAGGAGTCGGCGTGTATCACACTACGTTCCCG GAATTCCGGCTTTGGGGGCTTGAAGGGCACAATGATGTCCTCGACCTTCCTGCTACCGAACTAGGGCGAATTCTTCTTGT AACAGAGGGCCAGTTAGTGGCCCACTGCGGTACTGACGATTGCGAATTAAGCCGTGGCCAATCCGTCTGGTTGCCTGCCG GGGACGAGGTGAAAGTGACTGGTCAAGGACGTGGATTCCTGGCAAGTGCTGGGGTAGGGGACTCCTGA
Upstream 100 bases:
>100_bases TTAAGTACTTCGCGTCGTCGTGGAAGTCGTGGTACTCACAATCGTCGGGACTGTCCTCACCTAGGTGACTCGAGCCCAAC CAACGTGATGAAATCTAACC
Downstream 100 bases:
>100_bases ATGGAAGGTGGCATAACGCTGCTGACGTCGTGACCCCCCACTCGGTACCGGTAGTCGGGTGAGGGGGTCGAATCGCTCAC AGGCCCCCTCAACGTCCATC
Product: mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHHPDELGAGSREAFGDRLPFLL KILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRIFRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVD GLNEVLTPLSQNDGLATLVAAVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPCVGEYAQQISPGVGVYHTTFP EFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDDCELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS
Sequences:
>Translated_395_residues MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHHPDELGAGSREAFGDRLPFLL KILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRIFRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVD GLNEVLTPLSQNDGLATLVAAVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPCVGEYAQQISPGVGVYHTTFP EFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDDCELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS >Mature_395_residues MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHHPDELGAGSREAFGDRLPFLL KILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRIFRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVD GLNEVLTPLSQNDGLATLVAAVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPCVGEYAQQISPGVGVYHTTFP EFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDDCELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=413, Percent_Identity=30.5084745762712, Blast_Score=161, Evalue=8e-40, Organism=Escherichia coli, GI1787899, Length=397, Percent_Identity=32.9974811083123, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17557650, Length=429, Percent_Identity=25.4079254079254, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI71997620, Length=354, Percent_Identity=30.7909604519774, Blast_Score=126, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320839, Length=332, Percent_Identity=31.6265060240964, Blast_Score=120, Evalue=4e-28, Organism=Drosophila melanogaster, GI21356061, Length=400, Percent_Identity=30.75, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42109; Mature: 42109
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHH CCCCCCCCEECCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC PDELGAGSREAFGDRLPFLLKILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRI CHHHCCCCHHHHHCHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCH FRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVDGLNEVLTPLSQNDGLATLVA HCCCCCCCCEEEEEECHHHHCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHH AVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR HHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPC HHCCCCCEEEEECCCHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCCH VGEYAQQISPGVGVYHTTFPEFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDD HHHHHHHCCCCCCEEECCCCCEEEEECCCCCCEEECCHHHHCEEEEEECCCEEEECCCCC CELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS CCCCCCCEEEECCCCEEEEEECCCCEEEECCCCCC >Mature Secondary Structure MRALTGQVQHYDWGSADAIPAILGTRPDGTPWAEYWLGAHPKAPSALPDGTPLDQWLTHH CCCCCCCCEECCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC PDELGAGSREAFGDRLPFLLKILSANHALSIQAHPSREQAEKGFAAENEAGVPLDAPNRI CHHHCCCCHHHHHCHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCH FRDDWPKPEMIVALTDFDALCGFRDPSSSLVLLSGLGEVDGLNEVLTPLSQNDGLATLVA HCCCCCCCCEEEEEECHHHHCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHH AVLSGDDDVTPVVKRVVSASRAYLNDGADEDVRSLATTAVELWEDHPGDPSILVALLMNR HHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VRLAPGQQIHLCAGSMHAYLGGTGVEIMANSDNVLRGGLTSKYIDVKALLDHANMTPEPC HHCCCCCEEEEECCCHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCCH VGEYAQQISPGVGVYHTTFPEFRLWGLEGHNDVLDLPATELGRILLVTEGQLVAHCGTDD HHHHHHHCCCCCCEEECCCCCEEEEECCCCCCEEECCHHHHCEEEEEECCCEEEECCCCC CELSRGQSVWLPAGDEVKVTGQGRGFLASAGVGDS CCCCCCCEEEECCCCEEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1879695; 11677609 [H]