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The map label for this gene is yfhC [C]

Identifier: 50365494

GI number: 50365494

Start: 789719

End: 790147

Strand: Reverse

Name: yfhC [C]

Synonym: Mfl679

Alternate gene names: 50365494

Gene position: 790147-789719 (Counterclockwise)

Preceding gene: 50365495

Following gene: 50365493

Centisome position: 99.61

GC content: 22.14

Gene sequence:

>429_bases
ATGAAGAATTTAAATACGTACATAAATAAAATAAAAGTTAAAAATAAATCAAAAGACATACCTGTTTTTTCTTGTTTAAT
AAAAGACAATAAAATAGTTTTTAAGTCAAAAAATAATAGTTATAAAATAAAAAAAATAACAGGTCATGCTGAAATAAATG
TTATGAACAAGGCCTTTAAAAAAATAAAAAAAGGTAACCTTTCTGAATATACACTGTTTACAACTTTAGAACCTTGTTTG
ATGTGTTATGGTGCAATAAAACAGGCAAAGATAAAAGAAATAATATATTTAACAGAAAATGTAAAGTTGAGCTTTAGAAA
CGATGTGAACATAGATCAAATTAAAATAAATATACGTAAACTTGATCATGAAGAACTTCAATCAAAATACCAAAAAATAA
TTTCAGATTTTTTTCAAAAGAAAAGATAG

Upstream 100 bases:

>100_bases
TTGCCGTGATAAAGATTACGCCCGAATGAGTCAGGACCGGAAGGTAGCAGCTATAAGGGAATGTGTCTTGTATCACGGTT
TTTTTGTTTATAATTAAAAT

Downstream 100 bases:

>100_bases
GATAAAGTAATGCCCATAGGGCTTTTTTTATTTTAAAATAGCAATATTATTTTGGTTTTTAATCGTTATTAAAATTAGTA
TTGATTTATATATTAATTAC

Product: cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKNLNTYINKIKVKNKSKDIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEPCL
MCYGAIKQAKIKEIIYLTENVKLSFRNDVNIDQIKINIRKLDHEELQSKYQKIISDFFQKKR

Sequences:

>Translated_142_residues
MKNLNTYINKIKVKNKSKDIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEPCL
MCYGAIKQAKIKEIIYLTENVKLSFRNDVNIDQIKINIRKLDHEELQSKYQKIISDFFQKKR
>Mature_142_residues
MKNLNTYINKIKVKNKSKDIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEPCL
MCYGAIKQAKIKEIIYLTENVKLSFRNDVNIDQIKINIRKLDHEELQSKYQKIISDFFQKKR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16724; Mature: 16724

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLNTYINKIKVKNKSKDIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFK
CCCHHHHHHHEEECCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCEEEHHHHHHHH
KIKKGNLSEYTLFTTLEPCLMCYGAIKQAKIKEIIYLTENVKLSFRNDVNIDQIKINIRK
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCEEEEEEEEEE
LDHEELQSKYQKIISDFFQKKR
CCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLNTYINKIKVKNKSKDIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFK
CCCHHHHHHHEEECCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCEEEHHHHHHHH
KIKKGNLSEYTLFTTLEPCLMCYGAIKQAKIKEIIYLTENVKLSFRNDVNIDQIKINIRK
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCEEEEEEEEEE
LDHEELQSKYQKIISDFFQKKR
CCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]