Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 50364926

GI number: 50364926

Start: 135322

End: 135855

Strand: Direct

Name: atpF

Synonym: Mfl111

Alternate gene names: 50364926

Gene position: 135322-135855 (Clockwise)

Preceding gene: 50364925

Following gene: 50364927

Centisome position: 17.06

GC content: 29.21

Gene sequence:

>534_bases
ATGATATTTTTCGCAGAAACACAAACAGCTGGAGTTCCAGAAATCATAACATCTTTATTTCCTAACTTGCCAAACTTTAT
TGCGCACGTTATAGCTACAATTGTTTTAGTAGTTATACTATCAAAATTGATGTATAAACCATTTAGAAAAACTATTAAAG
ATAGAAGAAACAAAATAAATGAATTATTAAGCGAGGCTGTGCAAAAGCAAACAGAAGCAAATATTGGTGTTAGAAAAGCT
GAAGCATTATTGCAAGACGCTAAAACAGAATCTTCATTAATTATTCAAACTTCAAAAGTTGATGCTGACATTCAAAAAAC
TCACATCATATCTGAAGCTCATAAATACGCTGATATTATTAAGAATCAAGCAGAAAAAGACATTGCTCAAGAAAGATCAA
AAATAGAAGCAGAAATCAAGACAACAATAGTAAATGTTGCATTCGATGCTGCTGAACAAATTTTACAGACAGAAATCAAT
AAGACAAAAAACAAAAAAATTGTTGATGAATTTATTGAAAACCTAGATAAATAA

Upstream 100 bases:

>100_bases
GCAGCAGGAATTGCAGAATCAGGAGCTATTTACGCATTAGTTGTTGCTATTTTATTAATTTTCGTAGCTTAAGAAATAAA
AAGAAAGAAGGGTGTGTTAC

Downstream 100 bases:

>100_bases
AATTATGGTTTTAAAAGATAACGTTATTGATAATTGAGCAAATGCTTTAACAAAAATTGCTGTAAAAGAAAACAAAGTTA
AAAAAATGTTAGAACAAGCA

Product: ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIFFAETQTAGVPEIITSLFPNLPNFIAHVIATIVLVVILSKLMYKPFRKTIKDRRNKINELLSEAVQKQTEANIGVRKA
EALLQDAKTESSLIIQTSKVDADIQKTHIISEAHKYADIIKNQAEKDIAQERSKIEAEIKTTIVNVAFDAAEQILQTEIN
KTKNKKIVDEFIENLDK

Sequences:

>Translated_177_residues
MIFFAETQTAGVPEIITSLFPNLPNFIAHVIATIVLVVILSKLMYKPFRKTIKDRRNKINELLSEAVQKQTEANIGVRKA
EALLQDAKTESSLIIQTSKVDADIQKTHIISEAHKYADIIKNQAEKDIAQERSKIEAEIKTTIVNVAFDAAEQILQTEIN
KTKNKKIVDEFIENLDK
>Mature_177_residues
MIFFAETQTAGVPEIITSLFPNLPNFIAHVIATIVLVVILSKLMYKPFRKTIKDRRNKINELLSEAVQKQTEANIGVRKA
EALLQDAKTESSLIIQTSKVDADIQKTHIISEAHKYADIIKNQAEKDIAQERSKIEAEIKTTIVNVAFDAAEQILQTEIN
KTKNKKIVDEFIENLDK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_MESFL (Q6F206)

Other databases:

- EMBL:   AE017263
- RefSeq:   YP_053351.1
- ProteinModelPortal:   Q6F206
- GeneID:   2897675
- GenomeReviews:   AE017263_GR
- KEGG:   mfl:Mfl111
- HOGENOM:   HBG567705
- OMA:   QETRIVA
- ProtClustDB:   CLSK745904
- BioCyc:   MFLO265311:MFL111-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19987; Mature: 19987

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf5ad388)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFFAETQTAGVPEIITSLFPNLPNFIAHVIATIVLVVILSKLMYKPFRKTIKDRRNKIN
CEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLSEAVQKQTEANIGVRKAEALLQDAKTESSLIIQTSKVDADIQKTHIISEAHKYADII
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEEHHHHCHHHHHHHHHHHHHHHHHHH
KNQAEKDIAQERSKIEAEIKTTIVNVAFDAAEQILQTEINKTKNKKIVDEFIENLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCH
>Mature Secondary Structure
MIFFAETQTAGVPEIITSLFPNLPNFIAHVIATIVLVVILSKLMYKPFRKTIKDRRNKIN
CEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLSEAVQKQTEANIGVRKAEALLQDAKTESSLIIQTSKVDADIQKTHIISEAHKYADII
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEEHHHHCHHHHHHHHHHHHHHHHHHH
KNQAEKDIAQERSKIEAEIKTTIVNVAFDAAEQILQTEINKTKNKKIVDEFIENLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA