| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is trxB [H]
Identifier: 50364879
GI number: 50364879
Start: 82747
End: 83682
Strand: Direct
Name: trxB [H]
Synonym: Mfl064
Alternate gene names: 50364879
Gene position: 82747-83682 (Clockwise)
Preceding gene: 50364878
Following gene: 50364880
Centisome position: 10.43
GC content: 31.62
Gene sequence:
>936_bases ATGAAAAAACATATTAATGAAAATTTAAAAGATATTTTAATCATTGGTGGTGGACCTGCAGGTTTGACTGCTGGGGTTTA CGCAGCAAGAGCTGGAATGAAAACAATCATTTTAGAAAAAGAAGCACCAGGTGGGAAAATGGTTAAAACTGACACAATTG AAAACTACCCAGGCTTTGATAGTATAAAAGGACCAGACCTTGCATTAAAAATGTACATGCAAGTAATGAATCTTGGAGCT GAATTTGTATATGATGAAGTTATTAAAATTGAAAAAATGGACAATTATTTTATTGTAACTACTTTAAACGGGCAAATAAT TGAAGCTTTAAGTGTTATTGTTGCAACAGGTACGTTAGAAAATAAATTAGGTATACCAGGTGAAGATAATCTTTATGGAA AAGGTGTTAGTTATTGTGCTGTTTGTGATGGAGCATTCCATAAAGGAAATCCCGTTGCCATAGTTGGTGGAGGATACTCA GCTGTAGAAGAGGGCATATACTTAAGTAAATTTGTAAGTAAGTTATATGTTGTTGTAAGAAAAGATCATTTTAGAGTAGA CCCTGTAACTTTATCTAAATTAGAACAACTTGAAAATGTTGAATTTCTAATGAATTCTGTTGTTAAAAAAGTTAATGGTA TTGATAAAGTAGAATCTGTTGAAATTGAAAATGTTATTACAAAAGAAATTAAAACTGTACCTGTTACTGGTTTATTTCCA TATATAGGAGCAACTCCGGTAACTGAATTTTTAGAAAATCTTAATTTAGATAAAAATGAAGGTTACTTAACCGGAGACGC TAAATTAAAATCTAATATTAAAGGTTTATTCATAGCAGGAGATGTTAGGGATGTTCCTTTAAGACAAATAGCTATTGCTG CAGGAGATGGAGCATTAGCAGGCCAAATGGCAGTTAATTACGTACAAGAACTATAA
Upstream 100 bases:
>100_bases AATTTTTTAGTCTTAAGTTTAATAATATTAACAGGAATATTTATTATTTTTATGGCGCAATTTGTAATTCCATATAAATG AAGAGAAATAGGGTGATTAT
Downstream 100 bases:
>100_bases AGATATTTAAATGTAGAAAGGTGATCATATGAATATAAAAGATTTTAAGATAAATAAAATTTCGTTTGATTTTAAACGTG ACAAATTAAAGTGAATTTCA
Product: thioredoxin reductase NADPH
Products: NA
Alternate protein names: TRXR; General stress protein 35; GSP35 [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKKHINENLKDILIIGGGPAGLTAGVYAARAGMKTIILEKEAPGGKMVKTDTIENYPGFDSIKGPDLALKMYMQVMNLGA EFVYDEVIKIEKMDNYFIVTTLNGQIIEALSVIVATGTLENKLGIPGEDNLYGKGVSYCAVCDGAFHKGNPVAIVGGGYS AVEEGIYLSKFVSKLYVVVRKDHFRVDPVTLSKLEQLENVEFLMNSVVKKVNGIDKVESVEIENVITKEIKTVPVTGLFP YIGATPVTEFLENLNLDKNEGYLTGDAKLKSNIKGLFIAGDVRDVPLRQIAIAAGDGALAGQMAVNYVQEL
Sequences:
>Translated_311_residues MKKHINENLKDILIIGGGPAGLTAGVYAARAGMKTIILEKEAPGGKMVKTDTIENYPGFDSIKGPDLALKMYMQVMNLGA EFVYDEVIKIEKMDNYFIVTTLNGQIIEALSVIVATGTLENKLGIPGEDNLYGKGVSYCAVCDGAFHKGNPVAIVGGGYS AVEEGIYLSKFVSKLYVVVRKDHFRVDPVTLSKLEQLENVEFLMNSVVKKVNGIDKVESVEIENVITKEIKTVPVTGLFP YIGATPVTEFLENLNLDKNEGYLTGDAKLKSNIKGLFIAGDVRDVPLRQIAIAAGDGALAGQMAVNYVQEL >Mature_311_residues MKKHINENLKDILIIGGGPAGLTAGVYAARAGMKTIILEKEAPGGKMVKTDTIENYPGFDSIKGPDLALKMYMQVMNLGA EFVYDEVIKIEKMDNYFIVTTLNGQIIEALSVIVATGTLENKLGIPGEDNLYGKGVSYCAVCDGAFHKGNPVAIVGGGYS AVEEGIYLSKFVSKLYVVVRKDHFRVDPVTLSKLEQLENVEFLMNSVVKKVNGIDKVESVEIENVITKEIKTVPVTGLFP YIGATPVTEFLENLNLDKNEGYLTGDAKLKSNIKGLFIAGDVRDVPLRQIAIAAGDGALAGQMAVNYVQEL
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=313, Percent_Identity=33.8658146964856, Blast_Score=177, Evalue=7e-46, Organism=Escherichia coli, GI87081763, Length=303, Percent_Identity=34.983498349835, Blast_Score=156, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320560, Length=314, Percent_Identity=36.624203821656, Blast_Score=189, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6321898, Length=311, Percent_Identity=34.7266881028939, Blast_Score=182, Evalue=7e-47,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 33640; Mature: 33640
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHINENLKDILIIGGGPAGLTAGVYAARAGMKTIILEKEAPGGKMVKTDTIENYPGFD CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCCC SIKGPDLALKMYMQVMNLGAEFVYDEVIKIEKMDNYFIVTTLNGQIIEALSVIVATGTLE CCCCCHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHCCCCC NKLGIPGEDNLYGKGVSYCAVCDGAFHKGNPVAIVGGGYSAVEEGIYLSKFVSKLYVVVR CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHCHHHHHHHHHHEEEEE KDHFRVDPVTLSKLEQLENVEFLMNSVVKKVNGIDKVESVEIENVITKEIKTVPVTGLFP CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHH YIGATPVTEFLENLNLDKNEGYLTGDAKLKSNIKGLFIAGDVRDVPLRQIAIAAGDGALA HCCCCHHHHHHHHCCCCCCCCEEECCHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCHH GQMAVNYVQEL HHHHHHHHHHC >Mature Secondary Structure MKKHINENLKDILIIGGGPAGLTAGVYAARAGMKTIILEKEAPGGKMVKTDTIENYPGFD CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCCC SIKGPDLALKMYMQVMNLGAEFVYDEVIKIEKMDNYFIVTTLNGQIIEALSVIVATGTLE CCCCCHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHCCCCC NKLGIPGEDNLYGKGVSYCAVCDGAFHKGNPVAIVGGGYSAVEEGIYLSKFVSKLYVVVR CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHCHHHHHHHHHHEEEEE KDHFRVDPVTLSKLEQLENVEFLMNSVVKKVNGIDKVESVEIENVITKEIKTVPVTGLFP CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHH YIGATPVTEFLENLNLDKNEGYLTGDAKLKSNIKGLFIAGDVRDVPLRQIAIAAGDGALA HCCCCHHHHHHHHCCCCCCCCEEECCHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCHH GQMAVNYVQEL HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 9298659 [H]