Click here to switch to the map view.

The map label for this gene is 50086457

Identifier: 50086457

GI number: 50086457

Start: 3423251

End: 3424024

Strand: Direct

Name: 50086457

Synonym: ACIAD3499

Alternate gene names: NA

Gene position: 3423251-3424024 (Clockwise)

Preceding gene: 50086446

Following gene: 50086467

Centisome position: 95.13

GC content: 41.34

Gene sequence:

>774_bases
ATGAAAAAGTTAACTCTAGTCACAGCACTTTTGTCTTCACTCGCTTTTGTAGGAACCGCTGCTCACGCTTATCAAACAGA
AGTAAACGGTAATTATAACTACCTTGATCCAGATAACGGTGATGGTGTGAGCGTATTTGGTGCGAGTGGTACTTATTATT
TTAATCCAGTTCAAACCCGTAATTCACCATTGGCAGAAGCAGCATTCCTTGACCGTGCTAGCAGCGTAACATTGGGTGGA
CTTTATGGTGACAACGATGGAACCAAGCAAAGCAGCTTAGGGCTTTCAGGTGAATACTATGTACCAAATAGCGACTTTTA
TTTAGGTGCAGGTGTTGCTCGTGACGAAACTAAGGTTAAAAACTTTAGTGACACGAAAACCACGCGTTACAATGCTGAAG
TCGGTTATTTACCAGCACCGGGTTTATTAGTTGCACTTGGTTTACAAGGTTATGACACGAAAGACGGTGGTGACGATGTC
GATCCAACTTTACGTGCAAAATATGTGACTCAAGTTGGTCAACATGACGTGAACTTAGAAGCTCGTGGTGTATTCGGCAA
CAATGACAACAAACAATATTATGTCGCTGGTGACTACTATATCGACAAAACATTGAGCGTTGGTGCAGATTATCAAAAAG
ATAAAGCAACGAATTTAGATCAATGGGGCATCACTGCTAAAAAATTCTTCAATCAGCAAGTCAGTGTTGATGGCCGATTA
GGTTTTGGTGATGACTACAATACTTACTCAGTGGGTGCATCATACCGTTTCTAA

Upstream 100 bases:

>100_bases
AGTTCAGTTACGTTGACTAGATTGACGCACTGTTTTTTTCCACTAGACTAAAAGTTGTAACAAAACATTAATTAATAATT
TTTTTGGAGGGGAGATTTCC

Downstream 100 bases:

>100_bases
GCACTGCTTAAGAACATAAAAAAAATCGCTCAAATGAGCGATTTTTTTTATGTCTGATCTAAATGTAAGATGCGAAGTTG
TAAATTTACACTGCCATTAA

Product: porin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKLTLVTALLSSLAFVGTAAHAYQTEVNGNYNYLDPDNGDGVSVFGASGTYYFNPVQTRNSPLAEAAFLDRASSVTLGG
LYGDNDGTKQSSLGLSGEYYVPNSDFYLGAGVARDETKVKNFSDTKTTRYNAEVGYLPAPGLLVALGLQGYDTKDGGDDV
DPTLRAKYVTQVGQHDVNLEARGVFGNNDNKQYYVAGDYYIDKTLSVGADYQKDKATNLDQWGITAKKFFNQQVSVDGRL
GFGDDYNTYSVGASYRF

Sequences:

>Translated_257_residues
MKKLTLVTALLSSLAFVGTAAHAYQTEVNGNYNYLDPDNGDGVSVFGASGTYYFNPVQTRNSPLAEAAFLDRASSVTLGG
LYGDNDGTKQSSLGLSGEYYVPNSDFYLGAGVARDETKVKNFSDTKTTRYNAEVGYLPAPGLLVALGLQGYDTKDGGDDV
DPTLRAKYVTQVGQHDVNLEARGVFGNNDNKQYYVAGDYYIDKTLSVGADYQKDKATNLDQWGITAKKFFNQQVSVDGRL
GFGDDYNTYSVGASYRF
>Mature_257_residues
MKKLTLVTALLSSLAFVGTAAHAYQTEVNGNYNYLDPDNGDGVSVFGASGTYYFNPVQTRNSPLAEAAFLDRASSVTLGG
LYGDNDGTKQSSLGLSGEYYVPNSDFYLGAGVARDETKVKNFSDTKTTRYNAEVGYLPAPGLLVALGLQGYDTKDGGDDV
DPTLRAKYVTQVGQHDVNLEARGVFGNNDNKQYYVAGDYYIDKTLSVGADYQKDKATNLDQWGITAKKFFNQQVSVDGRL
GFGDDYNTYSVGASYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27865; Mature: 27865

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTLVTALLSSLAFVGTAAHAYQTEVNGNYNYLDPDNGDGVSVFGASGTYYFNPVQTR
CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCC
NSPLAEAAFLDRASSVTLGGLYGDNDGTKQSSLGLSGEYYVPNSDFYLGAGVARDETKVK
CCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCHHCC
NFSDTKTTRYNAEVGYLPAPGLLVALGLQGYDTKDGGDDVDPTLRAKYVTQVGQHDVNLE
CCCCCCEEEECCEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
ARGVFGNNDNKQYYVAGDYYIDKTLSVGADYQKDKATNLDQWGITAKKFFNQQVSVDGRL
EEEEECCCCCEEEEEEECEEEECEEECCCCCCCCCCCCCHHHCCHHHHHCCCEECCCCEE
GFGDDYNTYSVGASYRF
CCCCCCCEEEECCEECC
>Mature Secondary Structure
MKKLTLVTALLSSLAFVGTAAHAYQTEVNGNYNYLDPDNGDGVSVFGASGTYYFNPVQTR
CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCC
NSPLAEAAFLDRASSVTLGGLYGDNDGTKQSSLGLSGEYYVPNSDFYLGAGVARDETKVK
CCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCHHCC
NFSDTKTTRYNAEVGYLPAPGLLVALGLQGYDTKDGGDDVDPTLRAKYVTQVGQHDVNLE
CCCCCCEEEECCEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
ARGVFGNNDNKQYYVAGDYYIDKTLSVGADYQKDKATNLDQWGITAKKFFNQQVSVDGRL
EEEEECCCCCEEEEEEECEEEECEEECCCCCCCCCCCCCHHHCCHHHHHCCCEECCCCEE
GFGDDYNTYSVGASYRF
CCCCCCCEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA