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The map label for this gene is 50086443

Identifier: 50086443

GI number: 50086443

Start: 3408579

End: 3409376

Strand: Reverse

Name: 50086443

Synonym: ACIAD3482

Alternate gene names: NA

Gene position: 3409376-3408579 (Counterclockwise)

Preceding gene: 50086444

Following gene: 50086442

Centisome position: 94.74

GC content: 42.86

Gene sequence:

>798_bases
ATGCTACAGACTGAACAAGAAATGTTTTCACGTGATGGTGTGACCGTGATTCGTGGCTTATTTAAAGACTGGGTTGCACT
TTTGCGCCGTGGTGTCGAGCTAAATGAGCAGCAACCTGGTCCAAGCTTTCGAGACTACACGCCTGATCAGCCAGAAAATC
GTTTTTGGGCTGATTACTGCAATTGGCGACGAATTCAACCTTTTTACGAATTTGTCTATCAAAGTCCAGCAGGACAAATT
GCAAAAAGTCTGATGCAATCTCGTGATGTCCGTCTATTTCATGAGCATGTACTGGTCAAAAGTCCAAATTCATCCAAAGT
TACGCCATGGCATCATGATGCACCTTATTATCCTGTAAATGCTAAACAAACTTTAAGTCTGTGGATACCGCTTGATCCTA
TTTCCCGTGAATCCAGTATTGAGTTTGTTGCAGGGTCGCATCGCTGGAATAAACACTTTAAAGCTCAAAGTTTTAATGGA
CAATACTATGAACACTCAGGTATGCAGGAAGAGTCCTTACCCGATATTGACGGTCATCGAGAGCAGTACAATATTTTAGG
TTGGGAACTTGAACCAGGTGATGCAATTGCATTTGATTATCTTACCATTCATGGTGCACCAGGTAATTTATCCAGTGAGT
ATGCCAGACGCGCCGTGTCGTTTCGTTGGTTGGGGGATGACGCGATTTATGTCAATCGGGGTGGCAAGACCTCACCTGAG
TACCCGCATTTAAATACCATTTTAAAAACAGGCGACGCACTACCGATAGATGAATTTCCATTTATTCCCACATTATAA

Upstream 100 bases:

>100_bases
TAAATGTATTGATTGATCTGCTTACTTTTTTAATTCCTGAATGGGGAAAAAGTTTACCGCATTAAAGATATTTAAAATTT
AAGCGTTGGAGTAAGAAAAT

Downstream 100 bases:

>100_bases
AAAAGCCTCATTCGCCTTATATAGCCAATCTTACTTTTTTTCGAGATTGGTTTTCTTATTTTAATTTTAAAATGCTTTAT
TTAAATTGTTTAAACAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; Dioxygenase; Deoxygenase; Phytanoyl-CoA Dioxygenase Protein; Phytanoyl-CoA Dioxygenase Superfamily; SnoK-Like Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLQTEQEMFSRDGVTVIRGLFKDWVALLRRGVELNEQQPGPSFRDYTPDQPENRFWADYCNWRRIQPFYEFVYQSPAGQI
AKSLMQSRDVRLFHEHVLVKSPNSSKVTPWHHDAPYYPVNAKQTLSLWIPLDPISRESSIEFVAGSHRWNKHFKAQSFNG
QYYEHSGMQEESLPDIDGHREQYNILGWELEPGDAIAFDYLTIHGAPGNLSSEYARRAVSFRWLGDDAIYVNRGGKTSPE
YPHLNTILKTGDALPIDEFPFIPTL

Sequences:

>Translated_265_residues
MLQTEQEMFSRDGVTVIRGLFKDWVALLRRGVELNEQQPGPSFRDYTPDQPENRFWADYCNWRRIQPFYEFVYQSPAGQI
AKSLMQSRDVRLFHEHVLVKSPNSSKVTPWHHDAPYYPVNAKQTLSLWIPLDPISRESSIEFVAGSHRWNKHFKAQSFNG
QYYEHSGMQEESLPDIDGHREQYNILGWELEPGDAIAFDYLTIHGAPGNLSSEYARRAVSFRWLGDDAIYVNRGGKTSPE
YPHLNTILKTGDALPIDEFPFIPTL
>Mature_265_residues
MLQTEQEMFSRDGVTVIRGLFKDWVALLRRGVELNEQQPGPSFRDYTPDQPENRFWADYCNWRRIQPFYEFVYQSPAGQI
AKSLMQSRDVRLFHEHVLVKSPNSSKVTPWHHDAPYYPVNAKQTLSLWIPLDPISRESSIEFVAGSHRWNKHFKAQSFNG
QYYEHSGMQEESLPDIDGHREQYNILGWELEPGDAIAFDYLTIHGAPGNLSSEYARRAVSFRWLGDDAIYVNRGGKTSPE
YPHLNTILKTGDALPIDEFPFIPTL

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30693; Mature: 30693

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTEQEMFSRDGVTVIRGLFKDWVALLRRGVELNEQQPGPSFRDYTPDQPENRFWADYC
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
NWRRIQPFYEFVYQSPAGQIAKSLMQSRDVRLFHEHVLVKSPNSSKVTPWHHDAPYYPVN
CCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHEEEHEEEEECCCCCCCCCCCCCCCCCCCC
AKQTLSLWIPLDPISRESSIEFVAGSHRWNKHFKAQSFNGQYYEHSGMQEESLPDIDGHR
CCCEEEEEEECCCCCCCCCEEEEECCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCC
EQYNILGWELEPGDAIAFDYLTIHGAPGNLSSEYARRAVSFRWLGDDAIYVNRGGKTSPE
CEEEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCCCC
YPHLNTILKTGDALPIDEFPFIPTL
CCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLQTEQEMFSRDGVTVIRGLFKDWVALLRRGVELNEQQPGPSFRDYTPDQPENRFWADYC
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
NWRRIQPFYEFVYQSPAGQIAKSLMQSRDVRLFHEHVLVKSPNSSKVTPWHHDAPYYPVN
CCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHEEEHEEEEECCCCCCCCCCCCCCCCCCCC
AKQTLSLWIPLDPISRESSIEFVAGSHRWNKHFKAQSFNGQYYEHSGMQEESLPDIDGHR
CCCEEEEEEECCCCCCCCCEEEEECCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCC
EQYNILGWELEPGDAIAFDYLTIHGAPGNLSSEYARRAVSFRWLGDDAIYVNRGGKTSPE
CEEEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCCCC
YPHLNTILKTGDALPIDEFPFIPTL
CCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA