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The map label for this gene is yajR [H]

Identifier: 50086414

GI number: 50086414

Start: 3371923

End: 3373287

Strand: Reverse

Name: yajR [H]

Synonym: ACIAD3450

Alternate gene names: 50086414

Gene position: 3373287-3371923 (Counterclockwise)

Preceding gene: 50086415

Following gene: 50086413

Centisome position: 93.74

GC content: 44.54

Gene sequence:

>1365_bases
ATGATGAATGCATTGGAGCGTCGCTCAACGTTTGCATTAAGCAGTATTTTTGCCTTGCGTATGTTGGGTTTGTTCATGAT
TATTCCTGTGTTTTCAATTGCAGGACAATCCTATCAATACGCGACGCCAGCCCTGATTGGTTTGGCTGTAGGGGTGTATG
GCCTCAGTCAAGCACTGTTGCAAATTCCTTTTAGTCTGGTTGCAGACCGCTTTAGTCGTAAACCACTGGTGGTGATAGGT
TTGCTACTGTTTGCACTGGGTGGTGCAGTGGCAGCCATGTCACATACCATTTATGGTGTAATTATTGGACGTGCTATTGC
AGGTGCTGGCGCGGTATCTGCGGTAGTTATGGCATTATTGGCCGATGTGACACGTGAAGAACAGCGCACCAAAGCGATGG
CAGCCATGGGGATGAGTATTGGCCTGTCTTTTGTGGTGGCATTTAGTGTGGGGCCGTGGCTCACCAGTCTGGTCGGGATT
TCAGGCTTATTTTGGGTCACCACTGTGATGGGTCTGGTTGCGATTCTCATGCTGTTATTAGTTCCTAAAGTCACACGACA
CCATAAAAACTTTCAACAGGGTTATCTGGCGCAGTTAAAACAAGTGATTCAAATGGGAGATCTGAACCGTCTGCATCTTT
CGGTTTTTTCCTTACATCTTTTGCTGACCGCCATGTTTATTTATGTACCTTCCCAACTCATCGAGTTTGCAGGTATTCCA
TTATCAAAACATGGACTTGTATATTTACCACTACTGTTAGTCAGCCTGTTTTTTGCTTTTCCTAGTATTATTGTGGCGGA
AAAATATCGCAAAATGCGTGGCATTTTTCTGACCGCGATTACAGGTATTATTGTCGGGTTGCTGATCCTGATTTTTGGCT
ATGAGTCAAAATACATTCTGCTCACAGGGCTCGGTATTTTCTTTATTGCCTTTAATGTGATGGAAGCTTTATTGCCCTCT
TGGCTATCCAAATCTGCTCCAATTCAATCTAAAGCCACTGCCATGGGGATTAATGCCAGCAGCCAGTTTCTGGGCGCTTT
TTTTGGCGGTACGCTGGGTGGGCAATTGCTGATGTTACATAATACTTCACTGGGTTGGAGTATCTTGGCAGCGATTGCTA
TACTATGGCTGCTGATCAGTTTTAGTCTGGCTCAACCGCGTTATTTATCTTCAATTGTATTGCCATTACCAGAAGTTAAA
CAAACGGATGAGTGGACTTCAAAACTCTTGGCAATTCGTGGTATTGAAGAAGTCGTGGTGATGACTGAGCAGCGTGTGGC
TTATATAAAAGTCGATAAACGCGTCATTGATGATACTGCGCGACAACATTTAACGCAGTTGTTGGGCTCAGAGGTAGCCA
TTTAA

Upstream 100 bases:

>100_bases
ATAGGCACCCTTTTTTATGGGTGTGATATTTTCGTCAAATCAGGCGAAGTTTAATGTTGAATCCTCTATAATTTGATTAA
GTTAAGATAAGCGTGTTGAT

Downstream 100 bases:

>100_bases
GCATAACTCTTATAAAGTAAAACATAGAAATGTAATAGGAAGAAAACAGCTCATGCGTGGTGTAAATAAGGTTATTTTGG
TTGGTACTTTGGGTCGTGAT

Product: MFS family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MMNALERRSTFALSSIFALRMLGLFMIIPVFSIAGQSYQYATPALIGLAVGVYGLSQALLQIPFSLVADRFSRKPLVVIG
LLLFALGGAVAAMSHTIYGVIIGRAIAGAGAVSAVVMALLADVTREEQRTKAMAAMGMSIGLSFVVAFSVGPWLTSLVGI
SGLFWVTTVMGLVAILMLLLVPKVTRHHKNFQQGYLAQLKQVIQMGDLNRLHLSVFSLHLLLTAMFIYVPSQLIEFAGIP
LSKHGLVYLPLLLVSLFFAFPSIIVAEKYRKMRGIFLTAITGIIVGLLILIFGYESKYILLTGLGIFFIAFNVMEALLPS
WLSKSAPIQSKATAMGINASSQFLGAFFGGTLGGQLLMLHNTSLGWSILAAIAILWLLISFSLAQPRYLSSIVLPLPEVK
QTDEWTSKLLAIRGIEEVVVMTEQRVAYIKVDKRVIDDTARQHLTQLLGSEVAI

Sequences:

>Translated_454_residues
MMNALERRSTFALSSIFALRMLGLFMIIPVFSIAGQSYQYATPALIGLAVGVYGLSQALLQIPFSLVADRFSRKPLVVIG
LLLFALGGAVAAMSHTIYGVIIGRAIAGAGAVSAVVMALLADVTREEQRTKAMAAMGMSIGLSFVVAFSVGPWLTSLVGI
SGLFWVTTVMGLVAILMLLLVPKVTRHHKNFQQGYLAQLKQVIQMGDLNRLHLSVFSLHLLLTAMFIYVPSQLIEFAGIP
LSKHGLVYLPLLLVSLFFAFPSIIVAEKYRKMRGIFLTAITGIIVGLLILIFGYESKYILLTGLGIFFIAFNVMEALLPS
WLSKSAPIQSKATAMGINASSQFLGAFFGGTLGGQLLMLHNTSLGWSILAAIAILWLLISFSLAQPRYLSSIVLPLPEVK
QTDEWTSKLLAIRGIEEVVVMTEQRVAYIKVDKRVIDDTARQHLTQLLGSEVAI
>Mature_454_residues
MMNALERRSTFALSSIFALRMLGLFMIIPVFSIAGQSYQYATPALIGLAVGVYGLSQALLQIPFSLVADRFSRKPLVVIG
LLLFALGGAVAAMSHTIYGVIIGRAIAGAGAVSAVVMALLADVTREEQRTKAMAAMGMSIGLSFVVAFSVGPWLTSLVGI
SGLFWVTTVMGLVAILMLLLVPKVTRHHKNFQQGYLAQLKQVIQMGDLNRLHLSVFSLHLLLTAMFIYVPSQLIEFAGIP
LSKHGLVYLPLLLVSLFFAFPSIIVAEKYRKMRGIFLTAITGIIVGLLILIFGYESKYILLTGLGIFFIAFNVMEALLPS
WLSKSAPIQSKATAMGINASSQFLGAFFGGTLGGQLLMLHNTSLGWSILAAIAILWLLISFSLAQPRYLSSIVLPLPEVK
QTDEWTSKLLAIRGIEEVVVMTEQRVAYIKVDKRVIDDTARQHLTQLLGSEVAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=439, Percent_Identity=40.5466970387244, Blast_Score=337, Evalue=6e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49323; Mature: 49323

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNALERRSTFALSSIFALRMLGLFMIIPVFSIAGQSYQYATPALIGLAVGVYGLSQALL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
QIPFSLVADRFSRKPLVVIGLLLFALGGAVAAMSHTIYGVIIGRAIAGAGAVSAVVMALL
HCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ADVTREEQRTKAMAAMGMSIGLSFVVAFSVGPWLTSLVGISGLFWVTTVMGLVAILMLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPKVTRHHKNFQQGYLAQLKQVIQMGDLNRLHLSVFSLHLLLTAMFIYVPSQLIEFAGIP
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSKHGLVYLPLLLVSLFFAFPSIIVAEKYRKMRGIFLTAITGIIVGLLILIFGYESKYIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LTGLGIFFIAFNVMEALLPSWLSKSAPIQSKATAMGINASSQFLGAFFGGTLGGQLLMLH
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE
NTSLGWSILAAIAILWLLISFSLAQPRYLSSIVLPLPEVKQTDEWTSKLLAIRGIEEVVV
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
MTEQRVAYIKVDKRVIDDTARQHLTQLLGSEVAI
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]