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The map label for this gene is ssb [H]

Identifier: 50086413

GI number: 50086413

Start: 3371292

End: 3371870

Strand: Reverse

Name: ssb [H]

Synonym: ACIAD3449

Alternate gene names: 50086413

Gene position: 3371870-3371292 (Counterclockwise)

Preceding gene: 50086414

Following gene: 50086412

Centisome position: 93.7

GC content: 44.73

Gene sequence:

>579_bases
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCGGAAACTAAAACTTTTCCAAATGGTGGATC
TCTGACACAATTTTCAATTGCAACCAGCGAGGCGTGGACAGATAAAAGTACCGGTGAGCGTAAAGAACAGACCGAATGGC
ACCGTATTGTACTGCATAATCGTTTAGGTGAAATTGCACAACAATACCTGCGTAAAGGCTCTAAAGTTTATATTGAAGGT
TCATTGCGTACACGCCAGTGGACAGACCAGAATGGTCAGGAGCGTTATACCACCGAAATTCGTGGTGACCAGATGCAAAT
GCTAGATACACGTTCACAAGGCGATCAGCCAATGAGCGGTGGTAACGATTTTAATCAGCCACGCTTTAACAATAATGCGC
CGCAGCAAAACACAGGCTATAACCAAGGTGGCGGTTACAATAACAGCGGCAATAACAACTTCAATCAAGGCAGTGGTTAT
GGCAATGGCGGTAGCAATAACAGTAATCAAGGTGGTTATGTGCCAAAAGCACCGCAGCAACCTGCACCAGCCGATTTAGA
CGATGACTTACCATTTTAG

Upstream 100 bases:

>100_bases
GCGCGACAACATTTAACGCAGTTGTTGGGCTCAGAGGTAGCCATTTAAGCATAACTCTTATAAAGTAAAACATAGAAATG
TAATAGGAAGAAAACAGCTC

Downstream 100 bases:

>100_bases
ACGATACAAATAAATATTGTATTGGTTGATTAGAGAGAACCTGATGTATATCAGGTTCTTTTTTTATAGGAAAAATTAGG
ATATTTAATCTAAGGCTTGG

Product: ssDNA-binding protein controls activity of RecBCD nuclease

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGDQPMSGGNDFNQPRFNNNAPQQNTGYNQGGGYNNSGNNNFNQGSGY
GNGGSNNSNQGGYVPKAPQQPAPADLDDDLPF

Sequences:

>Translated_192_residues
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGDQPMSGGNDFNQPRFNNNAPQQNTGYNQGGGYNNSGNNNFNQGSGY
GNGGSNNSNQGGYVPKAPQQPAPADLDDDLPF
>Mature_192_residues
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGDQPMSGGNDFNQPRFNNNAPQQNTGYNQGGGYNNSGNNNFNQGSGY
GNGGSNNSNQGGYVPKAPQQPAPADLDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=34.5132743362832, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1790494, Length=194, Percent_Identity=46.3917525773196, Blast_Score=166, Evalue=7e-43,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 21249; Mature: 21249

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTEWHRIVLHN
CCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RLGEIAQQYLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGDQPMSG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHCCCCCCCCC
GNDFNQPRFNNNAPQQNTGYNQGGGYNNSGNNNFNQGSGYGNGGSNNSNQGGYVPKAPQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPADLDDDLPF
CCCCCCCCCCCC
>Mature Secondary Structure
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTEWHRIVLHN
CCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RLGEIAQQYLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDTRSQGDQPMSG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHCCCCCCCCC
GNDFNQPRFNNNAPQQNTGYNQGGGYNNSGNNNFNQGSGYGNGGSNNSNQGGYVPKAPQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPADLDDDLPF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA