| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is hsdM [C]
Identifier: 50086400
GI number: 50086400
Start: 3351497
End: 3353752
Strand: Reverse
Name: hsdM [C]
Synonym: ACIAD3432
Alternate gene names: 50086400
Gene position: 3353752-3351497 (Counterclockwise)
Preceding gene: 50086401
Following gene: 50086399
Centisome position: 93.2
GC content: 38.52
Gene sequence:
>2256_bases TTGAATTGGAGAAATGACATGACAAATGAAGTAAATCAACACTCACAACATGGCAAAATTGTAGGATTAGTTTGGAGTAT TGCCAATATTATTCGTGGGCCTTACCGCCCACCGCAGTATCGTCGTGTGATGTTGCCACTCATTGTATTGGGTCGTTTTG ATGCAATTCTTGCACCGTATGCAGATGAAATGAAAGCAAGCTATGAAAAGGCTGTGGCGACTTTGCAGGATAAAACCCCA AATGTCTTTTTACAAAAGCAATTGAGCCAAATTGCGGATAAAGACCGTAAACAAAATCTTTATAATATTAGTGGCTTTAA TCTAAAAAAATTATTAGATGACCCAGATCAATTCACGGCAAATTTAACGAAGTATATTGATGGTTTTTCACCTAAAGCAA AGGATATTTTTGCCAAGTTTGAATTTGCAAAAGAAATTGAAAAACTTGATGATGCAAACCGTCTATATAAAGTCTTCCAA GAGTTTCGTAATGGTTTAGGAGAGTCAGGTTTAAGCCTTGCGCCTAGCAGCGTCAGTAACTTACAAATGGGTTACTTATT TGAAGAATTAGTTCGTAAGTTTAATGAACAAGCCAATGAAGAAGCTGGGGATCACTTTACGCCTCGTGAAGTGATTGAAC TGATGGTGAACTTAATTTTTGAAGAAGATCAGGACGAGCTTGTTAAAGCAGGGGTACACCGCAGTATTTACGACCCAACA GCGGGTACGGGTGGAATGTTGTCTGAGTCAGAGAAATTTCTTAAGAAATACAATGATAAGATCAGCCTTGATATGTATGG ACAAGAGTATAACCCTGAGTCATATGCCATCTGTTGCTCTGACTTACTCATTAAAGATGAACCAGCCGAAAACATTGTCT ATGGTGATACGCTTGGTGTGAAAAATGCCAAGGAAAAAGATGGTTATGTTCCTCGTGATGGTCATGCAGACAAAGACTTT CACTATATGTTTTCAAATCCGCCTTTTGGGGTGGAATGGAAAAACCAAAAAGATTTTATTGATGAGGAAGAGAAACAAGG CTTTTCGGGTCGTTTCGGTGCAGGCTTACCACGAATCAATGACGGATCATTATTGTTCGCTCAACACATGATTTCTAAAA TGAAAGCTTCGCCTGAAAATGGTGGAGAGGGTTCACGTATTGCCGTGGTATTTAATGGCTCGCCCTTATTTACAGGTGAT GCGGGGAGTGGTGAAAGTAATATTCGTCGTTGGATTATTGAAAATGATTGGCTTGAAGCGATCATCGCTTTGCCTGATCA GATGTTTTATAACACAGGTATTTATACCTATATCTGGATTATTTCTAACAAAAAATCTGAACAGCGTAAGGGTAAAGTGC AGCTCATTGATGGTACAGCACATTATCAAAAGATGGCGAAAAGTTTGGGCAATAAACGTCATGAATTGTCTAAAGCGCAT ATCGCTGAACTGACCAAGTTTTATTCAAAATTTGAAGATCAAGACACCAGTGCATTGATTCAAAGCAAAACTGGTGAAGC AAAAATATGTTCGAAGATTTTTAATAATCAAGATTTTGGTTATTTAAAACTGACTGTAGAACGTCCTTTACGTTTGAACT TTACAATTTCTGCTGAACGTATTGCCTTGTTGGATGATCAATCTGCTTTTACCAGTTTAGCCAAGAGTAAGAAAGTCAAA GATACTGCTGAAATTTCGAAGGAAGAGCAAGCAGGTCGTTTACAACAGGAAGCGATTAAAAATGCACTTACTGCGAAAAT TTCTGATCAAGTTTGGAAAAACCGAGATGAGTTTTTAAAAGTACTTGATCCAATTTTGAAAGGTCTGACCTTCAAATTGG GTGCTCCTGTGAAAAAAGCGATTTTGGAAGCATTGTCTGAGCGTGATCAAACTGCCGATATATGCAAAGACAGTAAAGGG AATATTGAACCAGATACGCAATTGCGTGATACGGAACTGGTTGCATTCCCTGATCATTTGACTTTACCTTTACCTGTGAA TTATGACAAAGAGCCTGATTTATCTAAGTTATTGCCATTGGTGAAAGCGCATTGTGAAGCCTATTTAAAGGCGGAAGTTT TACCGCATGTGGCTGATGCGTGGATTGATTATAGTAAAACCAAAGTGGGGTATGAGATTCCGATTAACCGTCATTTTTAT ATTTATGAGCCACCACGTCCATTGGAAGAAATTAAGGCTGAGATTGTTCAGCTTGAGCAGGAGATTATGCAGATGTTAGG AGGTTTGTCTGCATGA
Upstream 100 bases:
>100_bases TTTAATATTCAAACAATTGACAGCTTTAAGAGCTGAATACAATCAAGCGAAGAGCGAACAAATTTTAGTGCAAGCCAAAG TGGCGCAATAAACCGAATTT
Downstream 100 bases:
>100_bases GTCAGTTACCATGTTACGAAAGTTATAAGAATAGTGGCGTGCAATGGTTAGGGGAAATCCCTAGCCATTGGGAAGTAAAA CGCATGAAGTTTTTACTATC
Product: type I restriction-modification system DNA methylase (HsdM)
Products: NA
Alternate protein names: M.HindVIIP [H]
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MNWRNDMTNEVNQHSQHGKIVGLVWSIANIIRGPYRPPQYRRVMLPLIVLGRFDAILAPYADEMKASYEKAVATLQDKTP NVFLQKQLSQIADKDRKQNLYNISGFNLKKLLDDPDQFTANLTKYIDGFSPKAKDIFAKFEFAKEIEKLDDANRLYKVFQ EFRNGLGESGLSLAPSSVSNLQMGYLFEELVRKFNEQANEEAGDHFTPREVIELMVNLIFEEDQDELVKAGVHRSIYDPT AGTGGMLSESEKFLKKYNDKISLDMYGQEYNPESYAICCSDLLIKDEPAENIVYGDTLGVKNAKEKDGYVPRDGHADKDF HYMFSNPPFGVEWKNQKDFIDEEEKQGFSGRFGAGLPRINDGSLLFAQHMISKMKASPENGGEGSRIAVVFNGSPLFTGD AGSGESNIRRWIIENDWLEAIIALPDQMFYNTGIYTYIWIISNKKSEQRKGKVQLIDGTAHYQKMAKSLGNKRHELSKAH IAELTKFYSKFEDQDTSALIQSKTGEAKICSKIFNNQDFGYLKLTVERPLRLNFTISAERIALLDDQSAFTSLAKSKKVK DTAEISKEEQAGRLQQEAIKNALTAKISDQVWKNRDEFLKVLDPILKGLTFKLGAPVKKAILEALSERDQTADICKDSKG NIEPDTQLRDTELVAFPDHLTLPLPVNYDKEPDLSKLLPLVKAHCEAYLKAEVLPHVADAWIDYSKTKVGYEIPINRHFY IYEPPRPLEEIKAEIVQLEQEIMQMLGGLSA
Sequences:
>Translated_751_residues MNWRNDMTNEVNQHSQHGKIVGLVWSIANIIRGPYRPPQYRRVMLPLIVLGRFDAILAPYADEMKASYEKAVATLQDKTP NVFLQKQLSQIADKDRKQNLYNISGFNLKKLLDDPDQFTANLTKYIDGFSPKAKDIFAKFEFAKEIEKLDDANRLYKVFQ EFRNGLGESGLSLAPSSVSNLQMGYLFEELVRKFNEQANEEAGDHFTPREVIELMVNLIFEEDQDELVKAGVHRSIYDPT AGTGGMLSESEKFLKKYNDKISLDMYGQEYNPESYAICCSDLLIKDEPAENIVYGDTLGVKNAKEKDGYVPRDGHADKDF HYMFSNPPFGVEWKNQKDFIDEEEKQGFSGRFGAGLPRINDGSLLFAQHMISKMKASPENGGEGSRIAVVFNGSPLFTGD AGSGESNIRRWIIENDWLEAIIALPDQMFYNTGIYTYIWIISNKKSEQRKGKVQLIDGTAHYQKMAKSLGNKRHELSKAH IAELTKFYSKFEDQDTSALIQSKTGEAKICSKIFNNQDFGYLKLTVERPLRLNFTISAERIALLDDQSAFTSLAKSKKVK DTAEISKEEQAGRLQQEAIKNALTAKISDQVWKNRDEFLKVLDPILKGLTFKLGAPVKKAILEALSERDQTADICKDSKG NIEPDTQLRDTELVAFPDHLTLPLPVNYDKEPDLSKLLPLVKAHCEAYLKAEVLPHVADAWIDYSKTKVGYEIPINRHFY IYEPPRPLEEIKAEIVQLEQEIMQMLGGLSA >Mature_751_residues MNWRNDMTNEVNQHSQHGKIVGLVWSIANIIRGPYRPPQYRRVMLPLIVLGRFDAILAPYADEMKASYEKAVATLQDKTP NVFLQKQLSQIADKDRKQNLYNISGFNLKKLLDDPDQFTANLTKYIDGFSPKAKDIFAKFEFAKEIEKLDDANRLYKVFQ EFRNGLGESGLSLAPSSVSNLQMGYLFEELVRKFNEQANEEAGDHFTPREVIELMVNLIFEEDQDELVKAGVHRSIYDPT AGTGGMLSESEKFLKKYNDKISLDMYGQEYNPESYAICCSDLLIKDEPAENIVYGDTLGVKNAKEKDGYVPRDGHADKDF HYMFSNPPFGVEWKNQKDFIDEEEKQGFSGRFGAGLPRINDGSLLFAQHMISKMKASPENGGEGSRIAVVFNGSPLFTGD AGSGESNIRRWIIENDWLEAIIALPDQMFYNTGIYTYIWIISNKKSEQRKGKVQLIDGTAHYQKMAKSLGNKRHELSKAH IAELTKFYSKFEDQDTSALIQSKTGEAKICSKIFNNQDFGYLKLTVERPLRLNFTISAERIALLDDQSAFTSLAKSKKVK DTAEISKEEQAGRLQQEAIKNALTAKISDQVWKNRDEFLKVLDPILKGLTFKLGAPVKKAILEALSERDQTADICKDSKG NIEPDTQLRDTELVAFPDHLTLPLPVNYDKEPDLSKLLPLVKAHCEAYLKAEVLPHVADAWIDYSKTKVGYEIPINRHFY IYEPPRPLEEIKAEIVQLEQEIMQMLGGLSA
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=278, Percent_Identity=25.1798561151079, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002296 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 85160; Mature: 85160
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRNDMTNEVNQHSQHGKIVGLVWSIANIIRGPYRPPQYRRVMLPLIVLGRFDAILAPY CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ADEMKASYEKAVATLQDKTPNVFLQKQLSQIADKDRKQNLYNISGFNLKKLLDDPDQFTA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHH NLTKYIDGFSPKAKDIFAKFEFAKEIEKLDDANRLYKVFQEFRNGLGESGLSLAPSSVSN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LQMGYLFEELVRKFNEQANEEAGDHFTPREVIELMVNLIFEEDQDELVKAGVHRSIYDPT HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC AGTGGMLSESEKFLKKYNDKISLDMYGQEYNPESYAICCSDLLIKDEPAENIVYGDTLGV CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEHHHHHCCCCCCCCEEECCCCCC KNAKEKDGYVPRDGHADKDFHYMFSNPPFGVEWKNQKDFIDEEEKQGFSGRFGAGLPRIN CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC DGSLLFAQHMISKMKASPENGGEGSRIAVVFNGSPLFTGDAGSGESNIRRWIIENDWLEA CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHEEEECHHHHHH IIALPDQMFYNTGIYTYIWIISNKKSEQRKGKVQLIDGTAHYQKMAKSLGNKRHELSKAH HHHCCHHHHHCCCCEEEEEEEECCCCHHHCCCEEEEECHHHHHHHHHHHCCHHHHHHHHH IAELTKFYSKFEDQDTSALIQSKTGEAKICSKIFNNQDFGYLKLTVERPLRLNFTISAER HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCE IALLDDQSAFTSLAKSKKVKDTAEISKEEQAGRLQQEAIKNALTAKISDQVWKNRDEFLK EEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VLDPILKGLTFKLGAPVKKAILEALSERDQTADICKDSKGNIEPDTQLRDTELVAFPDHL HHHHHHHCCEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCE TLPLPVNYDKEPDLSKLLPLVKAHCEAYLKAEVLPHVADAWIDYSKTKVGYEIPINRHFY EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEE IYEPPRPLEEIKAEIVQLEQEIMQMLGGLSA EECCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNWRNDMTNEVNQHSQHGKIVGLVWSIANIIRGPYRPPQYRRVMLPLIVLGRFDAILAPY CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ADEMKASYEKAVATLQDKTPNVFLQKQLSQIADKDRKQNLYNISGFNLKKLLDDPDQFTA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHH NLTKYIDGFSPKAKDIFAKFEFAKEIEKLDDANRLYKVFQEFRNGLGESGLSLAPSSVSN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LQMGYLFEELVRKFNEQANEEAGDHFTPREVIELMVNLIFEEDQDELVKAGVHRSIYDPT HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC AGTGGMLSESEKFLKKYNDKISLDMYGQEYNPESYAICCSDLLIKDEPAENIVYGDTLGV CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEHHHHHCCCCCCCCEEECCCCCC KNAKEKDGYVPRDGHADKDFHYMFSNPPFGVEWKNQKDFIDEEEKQGFSGRFGAGLPRIN CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC DGSLLFAQHMISKMKASPENGGEGSRIAVVFNGSPLFTGDAGSGESNIRRWIIENDWLEA CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHEEEECHHHHHH IIALPDQMFYNTGIYTYIWIISNKKSEQRKGKVQLIDGTAHYQKMAKSLGNKRHELSKAH HHHCCHHHHHCCCCEEEEEEEECCCCHHHCCCEEEEECHHHHHHHHHHHCCHHHHHHHHH IAELTKFYSKFEDQDTSALIQSKTGEAKICSKIFNNQDFGYLKLTVERPLRLNFTISAER HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCE IALLDDQSAFTSLAKSKKVKDTAEISKEEQAGRLQQEAIKNALTAKISDQVWKNRDEFLK EEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VLDPILKGLTFKLGAPVKKAILEALSERDQTADICKDSKGNIEPDTQLRDTELVAFPDHL HHHHHHHCCEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCE TLPLPVNYDKEPDLSKLLPLVKAHCEAYLKAEVLPHVADAWIDYSKTKVGYEIPINRHFY EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEE IYEPPRPLEEIKAEIVQLEQEIMQMLGGLSA EECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]