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The map label for this gene is comB

Identifier: 50086303

GI number: 50086303

Start: 3225374

End: 3226342

Strand: Reverse

Name: comB

Synonym: ACIAD3318

Alternate gene names: NA

Gene position: 3226342-3225374 (Counterclockwise)

Preceding gene: 50086304

Following gene: 50086302

Centisome position: 89.65

GC content: 38.7

Gene sequence:

>969_bases
ATGAAAATCTCTCGCCATTCAGGATTTACGCTAGTTGAACTCATGGTGGCCATTACATTGGGTTTGCTTGTTACAGCCGC
TGCAATTCAGCTCTATATCACAGGGATCACCAGTTACAATGTGCAAAAAGCGATGTCTAGCATTCAGGACAGTGCAAGCT
TTGGAGTCAATTATATTTTAGATGATGTACGTAGAGCCAATTTAAGTGCACCGTCTGCATATATGAATGATCAACAGCCC
AATTCAGGATTAATCCTGACGAGCAGTAATGTAAGTGAATTAAAAGACAATAAACCCTTACTCACCTTAAATGATGCTTA
TCTTACTAAATCTGCTGTAGGTGATGGAAACGTGTCACAGAAAAGTGATCAATTAACTATTCGCTATCAGGCAGTTGAGC
CGGGCTATGATTGTACAGGTAAGACATTGCCTGCGAATACCTATGTAGTTCAACGGTATTTCATAGGAAGTGATAAAGCC
TTGCGATGTGTTTCAGATCAGTACCAACAGACTGGAAATACTATTACGGGAATGGATAATAAAACAAAAACGACATTGGA
TCTTTCGGGAAATGGTCAGATTATTATTCCAAATGTTGATTATATGCGCGTTCAACTTGGATATGTTAAAGGTGCATTGA
ACAATCCAACTGCCATGAGTTATGTCTCAATTGGTGATTATTTGGATACCAATAAAACATCAGCAGTCAAAAAAAATATT
AATGGAATTCAGCAATCTATTAAGCCAAATATTAATGTGATTCAGATTGGATTATTGGTGCAATCCAATGAAACTGCTGG
AAATGACAGCATTGTTCGGAATCGTAATAAACAGGCGTTCGATGTCTTGGGGCAATCTGTCACACTCAATGAAAAAAATC
AGGATACCCGATTGCGCCAAGTAGTTACGCAAACTATTTCCTTAAGAAATGCGATGGGATGGGTTGAAGAGGGGTATGTA
ACGCCATGA

Upstream 100 bases:

>100_bases
TAAAACTGCACAGAACTTTACCAACTCTGACACCTGTTACAAAAGTGGTGGAAGTAGTTATGAGCGAAATACAACGTGTT
TGTTTCTGGAGGCGTACTAA

Downstream 100 bases:

>100_bases
AAAAACAACAACAAGGTGCGACCCTCATCATCGTATTGATGATTCTCTTACTGATTATGGTGGTGGGTACTTTAGCGATT
CGGCAAAGTATCAGTTCATT

Product: pilin like competence factor

Products: NA

Alternate protein names: Pilin Like Competence Factor

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRANLSAPSAYMNDQQP
NSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKA
LRCVSDQYQQTGNTITGMDNKTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTISLRNAMGWVEEGYV
TP

Sequences:

>Translated_322_residues
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRANLSAPSAYMNDQQP
NSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKA
LRCVSDQYQQTGNTITGMDNKTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTISLRNAMGWVEEGYV
TP
>Mature_322_residues
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRANLSAPSAYMNDQQP
NSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKA
LRCVSDQYQQTGNTITGMDNKTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTISLRNAMGWVEEGYV
TP

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35169; Mature: 35169

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCHHHHH
DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ
HHHHHCCCCCCHHHCCCCCCCCCEEEECCCHHHHHCCCCEEEECHHHHHHCCCCCCCCCC
KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDN
CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEECCCC
KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
CCEEEEEECCCCEEEEECCCEEEEEEEEHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ
HHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHCCCCHHHHHCCCEEEECCCCCHHHHHH
VVTQTISLRNAMGWVEEGYVTP
HHHHHHHHHHHHCHHHCCCCCC
>Mature Secondary Structure
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCHHHHH
DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ
HHHHHCCCCCCHHHCCCCCCCCCEEEECCCHHHHHCCCCEEEECHHHHHHCCCCCCCCCC
KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDN
CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEECCCC
KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
CCEEEEEECCCCEEEEECCCEEEEEEEEHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ
HHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHCCCCHHHHHCCCEEEECCCCCHHHHHH
VVTQTISLRNAMGWVEEGYVTP
HHHHHHHHHHHHCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA