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The map label for this gene is ydiK [C]

Identifier: 50086276

GI number: 50086276

Start: 3196958

End: 3198070

Strand: Direct

Name: ydiK [C]

Synonym: ACIAD3289

Alternate gene names: 50086276

Gene position: 3196958-3198070 (Clockwise)

Preceding gene: 50086275

Following gene: 50086277

Centisome position: 88.84

GC content: 42.23

Gene sequence:

>1113_bases
GTGCAACAATACGCGCCAACCATACAACGAGCTTTATTATTTGGATTATTAATTATCCTGCTACTTCTTGGTTTCCATAT
CCTGAAGTATTTTATTGTTCCTGTAGTGTGGGCCGCGATTATTGCTTATATGACCTGGCCAATTTATATCGGTATTCAAC
GTTTTTGCGGAGAAAATCGTCCCAATCTGAGTGCAACCCTCATGATCAGCCTGATTATTCTGGTCATTGGTATTCCACTA
ACTTTTGCCGTATTTATGCTACAACATGAGGGACGTAATCTATTTATTGAATTACAGCAGCAGATTTTCTCTGGACATTT
AAGCGCACCTGATTTTATCCGCGAGCTCCCGCTAGTGGGCAATGAAATCACCCGTATACTCAATGAAATCAATACCAATC
CTAGCAATCTCACTCAAAATTTATCATTGTGGATTCAAAGCCACATGGGTTATGGCCGCTTTGTACTCAGTGAGATCAGT
AAAAACCTAGTCAAGCTATGCTTTGCTTTGCTGTCATTATTCTTTTTCTACCGAGATGGACATACCATTTTGAATCAGGT
CAGTAAGGCACTCGAAATGGTCATTGGCCCGCGTATTCACCATTATATGGATACCATTTCAGAAACTACTCGTGCAGTTG
TGTATGGTGTAGGACTGACCGCAGTCGCACAGGCGATTCTGGCAGGACTCAGTTATTTCGTTGCAGGTGTCCCTAATCCA
ATGGTGTTAACCATTGTAACCTTTTTATTGGCACTGATTCCTTTTGGTACCCCACTTGCCTATACCTCTGTGGCTTTATG
GTTATTTTCGCAAGGCCAAATGATGGGGGCAATTGGTGTCATGCTCTGGGGCGTATGTATTGTCAGTACTTCAGATAATG
TAATTCGTCCCCTGGTCATTTCAGGTGCAACTCAAATTCCATTTCTGCTTATTATGTTTGGTGTGTTGGGAGGATTAGCA
AGTTTTGGTTTGGTCGGACTATTTATTGGGCCAGTGATTTTAGCCATTTTACTTGCGATCTGGCGTGAATGGCTGCATGA
AAATATTGAACCTGAACCAGTGCCCAAAGCGACCCTGATCTACGATGATTTGGATGACCAGACCAAGCTTTAA

Upstream 100 bases:

>100_bases
ATGTAACTTTGACTACGTAATAAAACCAACTGATGATTTGCCAGTGTATATTTTTCAGTTAATATGATTTGGCCCTGTCA
TTATTCATTTAGAGAGTTCT

Downstream 100 bases:

>100_bases
GTTTTTAATCGCTTAAATCATATGAATAATCACCACTGTGGATAGGCTTCTAGTGATCCACAGATTTTCAATTTTAGTTC
GTTTTTCTATTTCTGGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MQQYAPTIQRALLFGLLIILLLLGFHILKYFIVPVVWAAIIAYMTWPIYIGIQRFCGENRPNLSATLMISLIILVIGIPL
TFAVFMLQHEGRNLFIELQQQIFSGHLSAPDFIRELPLVGNEITRILNEINTNPSNLTQNLSLWIQSHMGYGRFVLSEIS
KNLVKLCFALLSLFFFYRDGHTILNQVSKALEMVIGPRIHHYMDTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNP
MVLTIVTFLLALIPFGTPLAYTSVALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVISGATQIPFLLIMFGVLGGLA
SFGLVGLFIGPVILAILLAIWREWLHENIEPEPVPKATLIYDDLDDQTKL

Sequences:

>Translated_370_residues
MQQYAPTIQRALLFGLLIILLLLGFHILKYFIVPVVWAAIIAYMTWPIYIGIQRFCGENRPNLSATLMISLIILVIGIPL
TFAVFMLQHEGRNLFIELQQQIFSGHLSAPDFIRELPLVGNEITRILNEINTNPSNLTQNLSLWIQSHMGYGRFVLSEIS
KNLVKLCFALLSLFFFYRDGHTILNQVSKALEMVIGPRIHHYMDTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNP
MVLTIVTFLLALIPFGTPLAYTSVALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVISGATQIPFLLIMFGVLGGLA
SFGLVGLFIGPVILAILLAIWREWLHENIEPEPVPKATLIYDDLDDQTKL
>Mature_370_residues
MQQYAPTIQRALLFGLLIILLLLGFHILKYFIVPVVWAAIIAYMTWPIYIGIQRFCGENRPNLSATLMISLIILVIGIPL
TFAVFMLQHEGRNLFIELQQQIFSGHLSAPDFIRELPLVGNEITRILNEINTNPSNLTQNLSLWIQSHMGYGRFVLSEIS
KNLVKLCFALLSLFFFYRDGHTILNQVSKALEMVIGPRIHHYMDTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNP
MVLTIVTFLLALIPFGTPLAYTSVALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVISGATQIPFLLIMFGVLGGLA
SFGLVGLFIGPVILAILLAIWREWLHENIEPEPVPKATLIYDDLDDQTKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=342, Percent_Identity=27.1929824561404, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41101; Mature: 41101

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQYAPTIQRALLFGLLIILLLLGFHILKYFIVPVVWAAIIAYMTWPIYIGIQRFCGENR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNLSATLMISLIILVIGIPLTFAVFMLQHEGRNLFIELQQQIFSGHLSAPDFIRELPLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC
NEITRILNEINTNPSNLTQNLSLWIQSHMGYGRFVLSEISKNLVKLCFALLSLFFFYRDG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HTILNQVSKALEMVIGPRIHHYMDTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH
MVLTIVTFLLALIPFGTPLAYTSVALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
SGATQIPFLLIMFGVLGGLASFGLVGLFIGPVILAILLAIWREWLHENIEPEPVPKATLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
YDDLDDQTKL
ECCCCCCCCC
>Mature Secondary Structure
MQQYAPTIQRALLFGLLIILLLLGFHILKYFIVPVVWAAIIAYMTWPIYIGIQRFCGENR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNLSATLMISLIILVIGIPLTFAVFMLQHEGRNLFIELQQQIFSGHLSAPDFIRELPLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC
NEITRILNEINTNPSNLTQNLSLWIQSHMGYGRFVLSEISKNLVKLCFALLSLFFFYRDG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HTILNQVSKALEMVIGPRIHHYMDTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH
MVLTIVTFLLALIPFGTPLAYTSVALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
SGATQIPFLLIMFGVLGGLASFGLVGLFIGPVILAILLAIWREWLHENIEPEPVPKATLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
YDDLDDQTKL
ECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]