Click here to switch to the map view.

The map label for this gene is ydfC [H]

Identifier: 50086263

GI number: 50086263

Start: 3186070

End: 3186972

Strand: Reverse

Name: ydfC [H]

Synonym: ACIAD3273

Alternate gene names: 50086263

Gene position: 3186972-3186070 (Counterclockwise)

Preceding gene: 50086267

Following gene: 50086262

Centisome position: 88.56

GC content: 38.54

Gene sequence:

>903_bases
ATGGCAATTTCTCTTGCTGCCGAAACTCAGCCTCCCGCATTTAAGCTCTATTTATGTATTGCAGTGACTGTCTTTTGTTG
GGGCTATTCACCTATTGGTGTACATAATGCCTTGCACTCATATACACCGCAGCATATTGCCTTGCTTCGTTTTTTGATTG
CATCGTTTTTTTTACTGCTTTTGGTCATGAAAAAAGGCATTCAACCTTTAAAGTGGAAAGATGCTCCTGCGCTTGCTGTA
TTAGGTTTTTTCTCTGTAACTCTGCATCATTTGCTTATAAATACAGGGCAGCAATATGTAAGTGCAGTCGCATCTAGTAT
TTTGAGTCAATCTATTCCTTTATTTACTTTTATTATTTCAGCTTTGCTGTTTAAGGAAAAAATCGTTTTCAAACAGTGGT
TGTGTATTTTATTGGGACTTGGCGGCGCCGTGTTAGTGGTCAGTGGAGATCATGGTTTTGGTGTACCGAGCCCTTACAGT
CTAATGATTGTGTTAGCCGCAATTGCATGGGGTCTGTACTTTAATTTATATAAAAAATTTGCTTTAAATTATGATGCATT
GAGCATGATGTGCTACATCATCTGGTTCGGGACTATTCCTTTACTATTTTATAGTGCTCATTTGCCTAGTGAAATTTTAC
ATGCTACTTGGCAAGCCAATATGTCGATTGTTTTATTGGGTATTTTTCCAAGTGCGATGGCTTATGTACTGTGGGGATAT
GTACTTAAAAATATGCCGTTAACGATTGCATCGAATTTTTTATATTGTTCGCCGATTGTCGCAATGAGTTTGGCAGTTGT
TTTCTTAAATGAAAAACCATCCATGATTGTGCTGCTCGGTGGTGTGATGATTGTGGGGAGTTTGGTGTGGATGAATTGGG
GGAATCGGCGTACTATCAAATAA

Upstream 100 bases:

>100_bases
ATTCACTTTTAATGAATATTTGACTCAATATAAGTTAATTTTATTTAACTATCCATGTGCATATGATGAAAGTGTTCCAT
TTCACTAGTGCAGATTTAAC

Downstream 100 bases:

>100_bases
GCTACAGATCATTAAATGATCTGTAGCTTAACGCTATGTCATGTACTATTTCCTTTAAGAGAATGAAATGATTGTTGTTA
CCTTGACCTATAAAAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHNALHSYTPQHIALLRFLIASFFLLLLVMKKGIQPLKWKDAPALAV
LGFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIISALLFKEKIVFKQWLCILLGLGGAVLVVSGDHGFGVPSPYS
LMIVLAAIAWGLYFNLYKKFALNYDALSMMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSIVLLGIFPSAMAYVLWGY
VLKNMPLTIASNFLYCSPIVAMSLAVVFLNEKPSMIVLLGGVMIVGSLVWMNWGNRRTIK

Sequences:

>Translated_300_residues
MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHNALHSYTPQHIALLRFLIASFFLLLLVMKKGIQPLKWKDAPALAV
LGFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIISALLFKEKIVFKQWLCILLGLGGAVLVVSGDHGFGVPSPYS
LMIVLAAIAWGLYFNLYKKFALNYDALSMMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSIVLLGIFPSAMAYVLWGY
VLKNMPLTIASNFLYCSPIVAMSLAVVFLNEKPSMIVLLGGVMIVGSLVWMNWGNRRTIK
>Mature_299_residues
AISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHNALHSYTPQHIALLRFLIASFFLLLLVMKKGIQPLKWKDAPALAVL
GFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIISALLFKEKIVFKQWLCILLGLGGAVLVVSGDHGFGVPSPYSL
MIVLAAIAWGLYFNLYKKFALNYDALSMMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSIVLLGIFPSAMAYVLWGYV
LKNMPLTIASNFLYCSPIVAMSLAVVFLNEKPSMIVLLGGVMIVGSLVWMNWGNRRTIK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33233; Mature: 33102

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHNALHSYTPQHIALLRFLIASFFLLL
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVMKKGIQPLKWKDAPALAVLGFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIIS
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHH
ALLFKEKIVFKQWLCILLGLGGAVLVVSGDHGFGVPSPYSLMIVLAAIAWGLYFNLYKKF
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALNYDALSMMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSIVLLGIFPSAMAYVLWGY
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH
VLKNMPLTIASNFLYCSPIVAMSLAVVFLNEKPSMIVLLGGVMIVGSLVWMNWGNRRTIK
HHHCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHNALHSYTPQHIALLRFLIASFFLLL
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVMKKGIQPLKWKDAPALAVLGFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIIS
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHH
ALLFKEKIVFKQWLCILLGLGGAVLVVSGDHGFGVPSPYSLMIVLAAIAWGLYFNLYKKF
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALNYDALSMMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSIVLLGIFPSAMAYVLWGY
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH
VLKNMPLTIASNFLYCSPIVAMSLAVVFLNEKPSMIVLLGGVMIVGSLVWMNWGNRRTIK
HHHCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]