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The map label for this gene is ynfM [H]

Identifier: 50086171

GI number: 50086171

Start: 3098112

End: 3099398

Strand: Direct

Name: ynfM [H]

Synonym: ACIAD3170

Alternate gene names: 50086171

Gene position: 3098112-3099398 (Clockwise)

Preceding gene: 50086169

Following gene: 50086174

Centisome position: 86.09

GC content: 41.57

Gene sequence:

>1287_bases
ATGGCGATTCGTTCTTCTACAAACGAGTCAGGGTCAACTATTGTCTCTCGTCAAGCGTCTGTAGATTTAAAAAACAGTAT
TCATCCAACTCAGTGGATTAGTCACGGTACGCGAGCTTATGTTAAAGCGGGACTTGCATTGTTCTTATTAGGCTTTGCCA
GTTTCTCCATGATTTACTGTGTACAACCGTTATTGCCTGAATTTACCAAAACCTTTCATATAAGCCCAGGTACAAGTGCA
CTGGCATTGTCATTAACCACAGGTTTTCTGGCTTTTTCTATTGTGCTATCCAGTGCTTTCTCTCAAGCGTTGGGACGTAA
AGGCTTAATGTTTGTTTCTATGGCATTGGCCGCACTACTCAATATTATCTGTGGCTGGGCACCCAACTGGCATCTACTTC
TTATTGCGCGTGCGTTACAGGGCTTTGTCATTGGTGGTGTACCAGCTGTTGCCATGGCATGGATTGCTGAAGAAATTGAA
CCTGCACATCTGGGCAAAACCATGGGCTTATATATTGCAGGTACTGCTTTCGGTGGCATGATGGGCCGTGTAGGAATGGG
TTTACTCACCGAATATTTTTCATGGCGAGTCGCATTGGGAATTCTAGGAACGTTGTGTCTGGTTTGTGCGATTGGATTTT
TATGGTTACTGCCCAAGTCACAAAATTTTATTGCCAAAAAAGGTTTACAGCTTCGCTTTCACTTATCTGCATGGAAAAGT
CATTTACATCATCCGCGATTACTGCGTATTTATATGATTGGTTTTTTGATTACCAGTATTTTTGTTACGCTGTTCAACTA
TGTGAGTTTCAGACTTTCAAATGCACCTTATCAGTTAAGCCAGACACAAATCAGCCTGATTTTTCTTTCTTATAGCTTAG
GTATGATTTCTTCGTCTCTTGCAGGCTCACTGGTCGATAAGCTTGGACGTAAAGCGGCCATGTTGCTTGGCTTCGGATGT
ATGTTAATTGGTATTTTACTCACGCTATATACTGGATTATTTGCAATTATTTTAGGAATTGCCGCGATTACCACGGGTTA
TTTTATTGCACATGCCATTGCCAGCAGTAGCGTAGGACTTGAAGCCAAACAAAGTAAGGGTTATGCAACGGCGCTTTATC
TTTTATTTTATTATTTAGGTTCAAGTATTATTGGTTCTGTAGGAGGGTGGTTCTGGCAATATGGCGGCTGGCATGCTGTC
GTATATTTAACCCTGACCCTAGTGGTGATCGCAATGATGATTGTTTTATTCGCTCCAAAGTCTCATACAACTTCGATAGT
ACAATAA

Upstream 100 bases:

>100_bases
TATTAGACAAATAAACACCTAATTGCTAATCTAACCGTGTTGGCAGTCAGGCAAGCACTGCCAACAAACCCTTCCTTTTG
ATCTTATCTCAGGTTTTCTC

Downstream 100 bases:

>100_bases
CCCATTTAATAGAATACCTGATGATACGTATTTCTCATCTTGATCGTCTGGTACTGACTGTCGCGAGTATTAAGCATAGC
TGTGAGTTTTAGTTGTTATC

Product: MFS family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MAIRSSTNESGSTIVSRQASVDLKNSIHPTQWISHGTRAYVKAGLALFLLGFASFSMIYCVQPLLPEFTKTFHISPGTSA
LALSLTTGFLAFSIVLSSAFSQALGRKGLMFVSMALAALLNIICGWAPNWHLLLIARALQGFVIGGVPAVAMAWIAEEIE
PAHLGKTMGLYIAGTAFGGMMGRVGMGLLTEYFSWRVALGILGTLCLVCAIGFLWLLPKSQNFIAKKGLQLRFHLSAWKS
HLHHPRLLRIYMIGFLITSIFVTLFNYVSFRLSNAPYQLSQTQISLIFLSYSLGMISSSLAGSLVDKLGRKAAMLLGFGC
MLIGILLTLYTGLFAIILGIAAITTGYFIAHAIASSSVGLEAKQSKGYATALYLLFYYLGSSIIGSVGGWFWQYGGWHAV
VYLTLTLVVIAMMIVLFAPKSHTTSIVQ

Sequences:

>Translated_428_residues
MAIRSSTNESGSTIVSRQASVDLKNSIHPTQWISHGTRAYVKAGLALFLLGFASFSMIYCVQPLLPEFTKTFHISPGTSA
LALSLTTGFLAFSIVLSSAFSQALGRKGLMFVSMALAALLNIICGWAPNWHLLLIARALQGFVIGGVPAVAMAWIAEEIE
PAHLGKTMGLYIAGTAFGGMMGRVGMGLLTEYFSWRVALGILGTLCLVCAIGFLWLLPKSQNFIAKKGLQLRFHLSAWKS
HLHHPRLLRIYMIGFLITSIFVTLFNYVSFRLSNAPYQLSQTQISLIFLSYSLGMISSSLAGSLVDKLGRKAAMLLGFGC
MLIGILLTLYTGLFAIILGIAAITTGYFIAHAIASSSVGLEAKQSKGYATALYLLFYYLGSSIIGSVGGWFWQYGGWHAV
VYLTLTLVVIAMMIVLFAPKSHTTSIVQ
>Mature_427_residues
AIRSSTNESGSTIVSRQASVDLKNSIHPTQWISHGTRAYVKAGLALFLLGFASFSMIYCVQPLLPEFTKTFHISPGTSAL
ALSLTTGFLAFSIVLSSAFSQALGRKGLMFVSMALAALLNIICGWAPNWHLLLIARALQGFVIGGVPAVAMAWIAEEIEP
AHLGKTMGLYIAGTAFGGMMGRVGMGLLTEYFSWRVALGILGTLCLVCAIGFLWLLPKSQNFIAKKGLQLRFHLSAWKSH
LHHPRLLRIYMIGFLITSIFVTLFNYVSFRLSNAPYQLSQTQISLIFLSYSLGMISSSLAGSLVDKLGRKAAMLLGFGCM
LIGILLTLYTGLFAIILGIAAITTGYFIAHAIASSSVGLEAKQSKGYATALYLLFYYLGSSIIGSVGGWFWQYGGWHAVV
YLTLTLVVIAMMIVLFAPKSHTTSIVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=408, Percent_Identity=39.4607843137255, Blast_Score=291, Evalue=6e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46314; Mature: 46183

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRSSTNESGSTIVSRQASVDLKNSIHPTQWISHGTRAYVKAGLALFLLGFASFSMIYC
CCCCCCCCCCCCHHHHHHHCCCHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VQPLLPEFTKTFHISPGTSALALSLTTGFLAFSIVLSSAFSQALGRKGLMFVSMALAALL
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NIICGWAPNWHLLLIARALQGFVIGGVPAVAMAWIAEEIEPAHLGKTMGLYIAGTAFGGM
HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHEEEHHHHHHH
MGRVGMGLLTEYFSWRVALGILGTLCLVCAIGFLWLLPKSQNFIAKKGLQLRFHLSAWKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEHHHHHH
HLHHPRLLRIYMIGFLITSIFVTLFNYVSFRLSNAPYQLSQTQISLIFLSYSLGMISSSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
AGSLVDKLGRKAAMLLGFGCMLIGILLTLYTGLFAIILGIAAITTGYFIAHAIASSSVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EAKQSKGYATALYLLFYYLGSSIIGSVGGWFWQYGGWHAVVYLTLTLVVIAMMIVLFAPK
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
SHTTSIVQ
CCCCCCCC
>Mature Secondary Structure 
AIRSSTNESGSTIVSRQASVDLKNSIHPTQWISHGTRAYVKAGLALFLLGFASFSMIYC
CCCCCCCCCCCHHHHHHHCCCHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VQPLLPEFTKTFHISPGTSALALSLTTGFLAFSIVLSSAFSQALGRKGLMFVSMALAALL
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NIICGWAPNWHLLLIARALQGFVIGGVPAVAMAWIAEEIEPAHLGKTMGLYIAGTAFGGM
HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHEEEHHHHHHH
MGRVGMGLLTEYFSWRVALGILGTLCLVCAIGFLWLLPKSQNFIAKKGLQLRFHLSAWKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEHHHHHH
HLHHPRLLRIYMIGFLITSIFVTLFNYVSFRLSNAPYQLSQTQISLIFLSYSLGMISSSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
AGSLVDKLGRKAAMLLGFGCMLIGILLTLYTGLFAIILGIAAITTGYFIAHAIASSSVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EAKQSKGYATALYLLFYYLGSSIIGSVGGWFWQYGGWHAVVYLTLTLVVIAMMIVLFAPK
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
SHTTSIVQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]