Click here to switch to the map view.

The map label for this gene is yciA [C]

Identifier: 50086142

GI number: 50086142

Start: 3063483

End: 3063902

Strand: Reverse

Name: yciA [C]

Synonym: ACIAD3139

Alternate gene names: 50086142

Gene position: 3063902-3063483 (Counterclockwise)

Preceding gene: 50086143

Following gene: 50086139

Centisome position: 85.14

GC content: 44.29

Gene sequence:

>420_bases
GTGTTAGACGCTCATATCAGCCCAGAAGGGACTTTATCACTTCAAACGATTGCCATGCCTGCAGATACCAACTGGAGTGG
TGATGTATTTGGTGGCTGGATTGTGTCACAAATGGATTTGGCTGGTGCAATTCATGCAGAACGTTTTAGTAAAGGACGTT
GTGCCACGATTTCGATCAATCAGATGACCTTCCTGGTTCCTGTGAAGGTCGGAGATGTGATTAGCTGTTATACCAAAATT
CTCAAAGTTGGCAACACATCTATCCAGATGCAAATAGAAGTTTGGGATAGTCATGATAGCTCACGACCACCTAAACGAGT
GACAGAGGGGGTATTTACCTTTGTTGCTGTGGATGTAAAAGGCAACAAGCGTACAATCGCGGAAGACCTCAAACAGCAGT
TTTTACAACACGCCAGTTAA

Upstream 100 bases:

>100_bases
AATAAAACCACCGAAATTGCTAGAATAAGTGGTGCTTTAAGATCAACCGAACTTCAACAATGGTTAGATCAGCAATTACA
TTCTTAATCTCGGAGTTAAT

Downstream 100 bases:

>100_bases
AAATTTGCATGACTCATACTTAATGAATGAGATCAGGATTAGTCATACAGGCTCCCCAGTACATGCTAGGTCGCCTGTAT
ATTTTTTACTTTCAGATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLDAHISPEGTLSLQTIAMPADTNWSGDVFGGWIVSQMDLAGAIHAERFSKGRCATISINQMTFLVPVKVGDVISCYTKI
LKVGNTSIQMQIEVWDSHDSSRPPKRVTEGVFTFVAVDVKGNKRTIAEDLKQQFLQHAS

Sequences:

>Translated_139_residues
MLDAHISPEGTLSLQTIAMPADTNWSGDVFGGWIVSQMDLAGAIHAERFSKGRCATISINQMTFLVPVKVGDVISCYTKI
LKVGNTSIQMQIEVWDSHDSSRPPKRVTEGVFTFVAVDVKGNKRTIAEDLKQQFLQHAS
>Mature_139_residues
MLDAHISPEGTLSLQTIAMPADTNWSGDVFGGWIVSQMDLAGAIHAERFSKGRCATISINQMTFLVPVKVGDVISCYTKI
LKVGNTSIQMQIEVWDSHDSSRPPKRVTEGVFTFVAVDVKGNKRTIAEDLKQQFLQHAS

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=129, Percent_Identity=47.2868217054264, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15265; Mature: 15265

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAHISPEGTLSLQTIAMPADTNWSGDVFGGWIVSQMDLAGAIHAERFSKGRCATISIN
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC
QMTFLVPVKVGDVISCYTKILKVGNTSIQMQIEVWDSHDSSRPPKRVTEGVFTFVAVDVK
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHEEEEEEEEEC
GNKRTIAEDLKQQFLQHAS
CCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDAHISPEGTLSLQTIAMPADTNWSGDVFGGWIVSQMDLAGAIHAERFSKGRCATISIN
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC
QMTFLVPVKVGDVISCYTKILKVGNTSIQMQIEVWDSHDSSRPPKRVTEGVFTFVAVDVK
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHEEEEEEEEEC
GNKRTIAEDLKQQFLQHAS
CCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]