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The map label for this gene is trpH [H]

Identifier: 50086134

GI number: 50086134

Start: 3057700

End: 3058551

Strand: Reverse

Name: trpH [H]

Synonym: ACIAD3131

Alternate gene names: 50086134

Gene position: 3058551-3057700 (Counterclockwise)

Preceding gene: 50086139

Following gene: 50086131

Centisome position: 84.99

GC content: 40.85

Gene sequence:

>852_bases
ATGCATGGCATAGATTTACATACACATAGCAATATTTCTGATGGAACTTTATCACCATCTTGTTTGGTGGATGCTGCAAT
TGCATGTGGAATCCATACATTGGCATTGACTGATCACGACACTATGGATGGTCTGGAAACTGCAATACAACAAGCCCAAG
GTCATGATATTCAAATTATTTCTGGTGCTGAAATTTCTAGCCAGTGGTCTAGACCCAATACGAAGAAGGCCTATGGTGTG
CACATTGTTGCATTAAATATGCAGAATCCTGAGCCTTTACTGGATGCATTAGTTATACAAAAAAATATTCGTGCTGAACG
TGCACAACAGATCTGTCAGATTTTACAGCAGTGTACTGGGCAGGATATTTATACAGATGTGCTTCTTAAAGTAGAGGGTG
AACCCGATCGGATTACCCGCACACATATTGCAAAAGCCTTGGTGGAAAAAGAAATTGTCGCTCGACCACAACAAGCTTTT
GATCGCTTTTTAAAAGAAGGTAAACGTGCTTATGTGAAGTTTGATGGTTTAAATTTGGCAGATACCATTCGGATTATTCA
TGAGAGTGAAGGATTTGCCATCTTGGCGCATCCTACACGTTATGATTTATCCTCGACCAATGTTCGCTACCTGATTGAGC
TATTTGCGAAAATGGGAGGAGATGCCGTAGAACTTCCACCAAGTGTCGATCCTGTTTCTACTCGTCAAATGATTGATCGC
ATAATTCAACAGTTTGATCTTAAAGTCTCGATTGGGAGTGACTTTCATGGCGAAAATATGCCCTGGATTAAACTTGGGCA
TACACCTCAACCAAATCCGCATCAAACTGGGATTTGGGAAAGCTTTCGTTAA

Upstream 100 bases:

>100_bases
TTTTCAACAAGTAATAAAAAATAATAATGGGCACAAAGTCTAAAAGTGCTTTCATGTTAGAGTATCTAAACCAGATCAAA
CGGATAGCATAGTATAGAAG

Downstream 100 bases:

>100_bases
TTTGAGTATCAACTCAGTTTTGTCCGTTATTTCCCCATTTTAAGTAAGCCGCTCTTTGGCTTAAGAGGGTGTAATAGCGC
TTCACATGTGGACAGTCGGG

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MHGIDLHTHSNISDGTLSPSCLVDAAIACGIHTLALTDHDTMDGLETAIQQAQGHDIQIISGAEISSQWSRPNTKKAYGV
HIVALNMQNPEPLLDALVIQKNIRAERAQQICQILQQCTGQDIYTDVLLKVEGEPDRITRTHIAKALVEKEIVARPQQAF
DRFLKEGKRAYVKFDGLNLADTIRIIHESEGFAILAHPTRYDLSSTNVRYLIELFAKMGGDAVELPPSVDPVSTRQMIDR
IIQQFDLKVSIGSDFHGENMPWIKLGHTPQPNPHQTGIWESFR

Sequences:

>Translated_283_residues
MHGIDLHTHSNISDGTLSPSCLVDAAIACGIHTLALTDHDTMDGLETAIQQAQGHDIQIISGAEISSQWSRPNTKKAYGV
HIVALNMQNPEPLLDALVIQKNIRAERAQQICQILQQCTGQDIYTDVLLKVEGEPDRITRTHIAKALVEKEIVARPQQAF
DRFLKEGKRAYVKFDGLNLADTIRIIHESEGFAILAHPTRYDLSSTNVRYLIELFAKMGGDAVELPPSVDPVSTRQMIDR
IIQQFDLKVSIGSDFHGENMPWIKLGHTPQPNPHQTGIWESFR
>Mature_283_residues
MHGIDLHTHSNISDGTLSPSCLVDAAIACGIHTLALTDHDTMDGLETAIQQAQGHDIQIISGAEISSQWSRPNTKKAYGV
HIVALNMQNPEPLLDALVIQKNIRAERAQQICQILQQCTGQDIYTDVLLKVEGEPDRITRTHIAKALVEKEIVARPQQAF
DRFLKEGKRAYVKFDGLNLADTIRIIHESEGFAILAHPTRYDLSSTNVRYLIELFAKMGGDAVELPPSVDPVSTRQMIDR
IIQQFDLKVSIGSDFHGENMPWIKLGHTPQPNPHQTGIWESFR

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=281, Percent_Identity=33.4519572953737, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31553; Mature: 31553

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGIDLHTHSNISDGTLSPSCLVDAAIACGIHTLALTDHDTMDGLETAIQQAQGHDIQII
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
SGAEISSQWSRPNTKKAYGVHIVALNMQNPEPLLDALVIQKNIRAERAQQICQILQQCTG
ECCCHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDIYTDVLLKVEGEPDRITRTHIAKALVEKEIVARPQQAFDRFLKEGKRAYVKFDGLNLA
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCHH
DTIRIIHESEGFAILAHPTRYDLSSTNVRYLIELFAKMGGDAVELPPSVDPVSTRQMIDR
HHEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
IIQQFDLKVSIGSDFHGENMPWIKLGHTPQPNPHQTGIWESFR
HHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHGIDLHTHSNISDGTLSPSCLVDAAIACGIHTLALTDHDTMDGLETAIQQAQGHDIQII
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
SGAEISSQWSRPNTKKAYGVHIVALNMQNPEPLLDALVIQKNIRAERAQQICQILQQCTG
ECCCHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDIYTDVLLKVEGEPDRITRTHIAKALVEKEIVARPQQAFDRFLKEGKRAYVKFDGLNLA
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCHH
DTIRIIHESEGFAILAHPTRYDLSSTNVRYLIELFAKMGGDAVELPPSVDPVSTRQMIDR
HHEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
IIQQFDLKVSIGSDFHGENMPWIKLGHTPQPNPHQTGIWESFR
HHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]